Job Description A0JP43 Confidence 95.75% Date Tue Jul 30 13:08:59 BST 2013 Rank 33 Aligned Residues 128 % Identity 10% Template c3k2nB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:sigma-54-dependent transcriptional regulator; PDBTitle: the crystal structure of sigma-54-dependent transcriptional2 regulator domain from chlorobium tepidum tls Resolution 2.50 Å

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		935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	D	R	E	R	R	E	A	S	V	F	F	E	X	L	R	F	E	L	P	E	Q	L	R	H	Q	T	R	S	I	A	G	T	W	L	E	G	H	L	D	D	R	T	V	T	V	A	S	I	A	R	D	I	P	S	F	G	A	D
Template Known Secondary structure					T	T	T	T										S	S				G	G	G			S					T	T	S	T	T	G	G	G	T	T			S						T	T	T	S		T	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		995	.	.	.				.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		N	S	F	R	.	.	.	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A
Query Conservation						.	.	.
Alig confidence						.	.	.																	.												.	.	.	.
Template Conservation																									.												.	.	.	.
Template Sequence		G	A	P	L	L	W	T	L	H	E	L	G	X	R	Q	I	V	L	S	P	L	R	S	.	G	G	R	V	I	G	F	L	S	F	V	.	.	.	.	S	A	E	E	K	L	W	S	D	G	D	K	S	L	L	S	G	V	S	S	S
Template Known Secondary structure		T										T	T												.	T	T										.	.	.	.		S	S
Template Predicted Secondary structure																									.												.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		1052	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	T	A	Y	H	H	V	H	S	R	E	H	V	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	I	A	V	S	N	A	L	A	Y	E	E	L	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D