Job Description A0JP43 Confidence 29.55% Date Tue Jul 30 13:08:59 BST 2013 Rank 97 Aligned Residues 68 % Identity 18% Template c3jpyA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glutamate [nmda] receptor subunit epsilon-2; PDBTitle: crystal structure of the zinc-bound amino terminal domain of the nmda2 receptor subunit nr2b Resolution 3.21 Å

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		935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.		.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	.	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F
Query Conservation																				.
Alig confidence																				.																				.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	S	E	H	S	F	I	P	E	P	K	S	S	C	Y	N	T	H	E	K	R	I	Y	Q	S	N	M	L	N	R	Y	L	I	N	V	T	F	.	.	.	.	E	G	R	D	L	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S	S									S	S	S																	T	T				.	.	.	.	T	T					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350
		994	.	.	.	.	.	1000	.	.		.	.	.	.	.	.	.	1010	.	.		.	.	.	.	.	.	.	1020	.
Predicted Secondary structure											.											.
Query SS confidence											.											.
Query Sequence		W	N	S	F	R	S	K	N	E	.	Y	N	G	S	F	L	A	L	P	L	.	Q	D	A	Y	M	R	I	F	G
Query Conservation											.											.
Alig confidence		.	.	.							.											.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	S	E	D	G	Y	Q	M	H	P	K	L	V	I	I	L	L	N	K	E	R	K	W	E	R	V	G
Template Known Secondary structure		.	.	.	B		T	T	S	B	B	S	S										S	S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D