Job Description A0JP43 Confidence 85.98% Date Tue Jul 30 13:08:59 BST 2013 Rank 53 Aligned Residues 161 % Identity 12% Template c3e98B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution Resolution 2.43 Å

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		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	V	L	E	S	V	V	E	F	L	M	G	S	L	E	R	S	H	V	E	G	L	R	N	C	A	R	R	K	W	L	H	Q	I	Q	Y	A	A	E	T	S	G	V	S	L	E	P	V	Y	T	E	T	F	R	V	L	T	Q
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	R	L	L	R	E	R	N	I	E	X	R	H	R	L	S	Q	L	X	D	V	A	R	E	N	D	R	L	F	D	K	T	R	R	L	V	L	D	L	L	D	A	T	S	L	E	D	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																											T			S				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		914	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	E	A	H	G	N	K	K	I	S	A	H	I	S	L	L	E	E	N	V	F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	V	V	S	T	V	E	D	S	L	R	H	E	F	Q	V	P	Y	V	S	L	I	L	F	S	D	S	R	S	V	S	S	A	E	A	H	Q	A	I	G	G	L	L	S	G	K	T	V	C	G	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.												T	S			S																							T	T	S									S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		974	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W	N	S	F	R	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.
Template Sequence		R	P	H	E	L	A	F	L	F	G	E	S	D	R	D	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	A	V	V	S	L	S	F	Q	.	.	G	L	H	G	V	L	A	I	G	S	P	D	P	Q	H	.
Template Known Secondary structure																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S									S	S	.	.	S										S	S	T	T	T	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		1034	.	.	.	.	.	1040		.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		I	N	I	F	L	P	H	.	E	I	K	F	Y	Q	G	V	A	N	A	F	S	T	A
Query Conservation									.
Alig confidence		.	.	.					.
Template Conservation		.	.	.
Template Sequence		.	.	.	Y	K	S	S	L	G	T	L	F	L	G	Y	V	A	E	V	L	A	R	V
Template Known Secondary structure		.	.	.	T	S	S	T	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D