 |
| Job Description | A0JP43 | | Confidence | 20.65% | Date | Tue Jul 30 13:08:59 BST 2013 |
| Rank | 156 | Aligned Residues | 71 |
| % Identity | 21% | Template | c2rr8A_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:iqgap1 protein; |
PDBTitle: solution structure of calponin homology domain of iqgap1
|
| Resolution | UNK |
|
 |
|   |   |
1052 | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 1100 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | S | T | A | Y | H | H | V | H | S | R | E | H | V | L | H | S | V | M | T | G | I | R | W | L | F | S | V | T | S | G | I | T | T | I | T | T | C | F | I | E | P | S | S | E | Q | E | . |
. |
. |
. |
. |
D | Y | V | L | R | N | M | M |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|
|
|
|   | . | . | . | . | . | . |   |   |   |
| . |
|
|   |
|
|
|   |
|
|   |
| . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
Q | N | V | A | Y | E | Y | L | C | . |
. |
. |
. |
. |
. |
H | L | E | E | . |
A | K | R | W | M | E | A | C | L | G | E | . |
. |
. |
. |
. |
. |
. |
D | L | P | P | T | T | E | L | E | E | G | L | R | N | G | V | Y | L | A | K | L | G |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  | S |
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
37 | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
|   |
|   |   |
1107 | . | . | 1110 | . | . | . | . | |
|
|
. | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|  | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | T | D | C | L | G | L | A | . |
. |
. |
E | I | H | T | D | P | P | T | I | T | R | N | A | C | I | F | R | D | F | L | F | K | C | T | D | T |
| Query Conservation |   |
  |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |
|   |   |   |
|
|
| Template Sequence |   |
N | F | F | S | P | K | V | V | S | L | K | K | I | Y | D | R | E | Q | T | R | Y | K | A | T | G | L | . |
. |
. |
. |
H | F | R | H | T | D | N |
| Template Known Secondary structure |   |
 |  | S |
| T | T | T | S |
| S | S |
| S | S | T | T | T |
|  |  |  |  |  | T |
|
| . | . | . | . |
| S | S | T |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
. | 110 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|