Job Description A0JP43 Confidence 98.52% Date Tue Jul 30 13:08:59 BST 2013 Rank 2 Aligned Residues 124 % Identity 14% Template c2rr7A_ PDB info PDB header:motor protein Chain: A: PDB Molecule:dynein heavy chain 9; PDBTitle: microtubule binding domain of dynein-c Resolution UNK Model Dimensions (Å) X:50.413 Y:38.980 Z:34.104

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		1234	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	Q	E	L	Q	E	C	L	C	L	L	D	S	M	D	F	V	S	L	L	L	Y	E	H	K	Y	H	V	D	S	I	L	Q	D	I	T	L	Q	E	V	E	A	N	V	A	L	V	H	D	V	L	K	G	V	I	L	F	S	Q
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	E	A	A	L	K	A	L	D	T	L	K	P	A	D	I	T	E	V	K	G	M	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	G	V	R	R	V	L	E	A	I	C	I	M	K	G
Template Known Secondary structure													S											S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										T	T	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
		1294	.								.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.		.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.		.	.
Predicted Secondary structure				.	.	.	.	.	.	.																				.																													.
Query SS confidence				.	.	.	.	.	.	.																				.																													.
Query Sequence		R	E	.	.	.	.	.	.	.	K	D	S	L	S	D	L	E	E	W	E	K	W	K	F	H	I	N	K	.	Y	L	V	E	E	I	C	V	L	D	P	T	A	S	N	V	E	V	N	V	E	L	V	T	S	Y	I	Q	.	A	H
Query Conservation				.	.	.	.	.	.	.																				.																													.
Alig confidence				.	.	.	.	.	.	.																				.												.																	.
Template Conservation																																										.
Template Sequence		V	K	P	A	R	V	K	D	T	A	S	G	R	M	V	D	D	Y	W	E	A	S	K	K	M	L	M	E	F	D	F	L	D	S	L	R	K	F	D	K	.	D	H	I	P	P	E	V	I	V	K	I	R	P	F	A	Q	D	P	E
Template Known Secondary structure										T	T	T		S														S		S	S								S		G	.	G	G							T	T	S	T	T	T	S	S		T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		1345	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	T	E	V	W	N	F	R	N	I	V	I	E	L	L	Y	H	W	I	N	I	C	L	T	L	I	E	L	N	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	P	K	V	I	E	K	Q	S	V	A	C	A	G	L	C	S	W	V	I	A	L	E	K	Y	D	K	V	I	K	E
Template Known Secondary structure		S	S									T	T	T																	T	T	S
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D