Return to main results Retrieve Phyre Job Id

Job DescriptionA0JP43
Confidence38.86%DateTue Jul 30 13:08:59 BST 2013
Rank87Aligned Residues30
% Identity37%Templatec2rajA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:sorting nexin-9; PDBTitle: so4 bound px-bar membrane remodeling unit of sorting nexin 9
Resolution2.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1361........1370.........1380. ........1390.....
Predicted Secondary structure 




.








Query SS confidence 




















.













Query Sequence  YHWINICLTLIELNMRQDVSI. IPPLPKKSATSIYA
Query Conservation                       .              
Alig confidence 







.....







.













Template Conservation 
 

   
.....    
  
 






       
Template Sequence  FDWLYERL. . . . . LVKFGSAIPIPSLPDKQVTGRFE
Template Known Secondary structure  .....TTTS









TT
SS
Template Predicted Secondary structure  .....

















Template SS confidence 



































   290....... ..300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D