Job Description A0JP43 Confidence 26.14% Date Tue Jul 30 13:08:59 BST 2013 Rank 114 Aligned Residues 121 % Identity 7% Template c2c37L_ PDB info PDB header:hydrolase Chain: L: PDB Molecule:probable exosome complex exonuclease 1; PDBTitle: rnase ph core of the archaeal exosome in complex with u82 rna Resolution 2.80 Å

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		1101	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.												1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	R	N	M	M	V	T	D	C	L	G	L	A	E	I	H	T	D	P	P	T	I	T	R	N	A	C	I	.	.	.	.	.	.	.	.	.	.	.	F	R	D	F	L	F	K	C	T	D	T	S	E	V	I	L	A	S	S	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	E	S	A	V	L	V	E	L	F	P	R	T	A	I	D	V	F	T	E	I	L	Q	A	D	A	G	S	R	L	V	S	L	M	A	A	S	L	A	L	A	D	A	G	I	P	M	R	D	L	I	A	G	V	A	V	G	K	A
Template Known Secondary structure					T	T	B		G	G	G	S	T	T													S	S																	T	T			B	S	S										S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		1150	.	.	.	.	.	.	.	.	.	1160					.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.				.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.
Predicted Secondary structure													.	.	.	.																							.	.	.
Query SS confidence													.	.	.	.																							.	.	.
Query Sequence		G	E	T	H	I	A	I	P	L	R	Q	.	.	.	.	R	T	K	E	A	M	G	I	L	D	V	N	I	G	R	S	R	M	L	L	Y	Q	.	.	.	E	Y	K	D	L	Q	K	M	V	K	M	I	Q	N	V	S	Y	E	I	L
Query Conservation													.	.	.	.																							.	.	.
Alig confidence													.	.	.	.																							.	.	.
Template Conservation
Template Sequence		D	G	V	I	I	L	D	L	N	E	T	E	D	M	W	G	E	A	D	M	P	I	A	M	M	P	S	L	N	Q	V	T	L	F	Q	L	N	G	S	M	T	P	D	E	F	R	Q	A	F	D	L	A	V	K	G	I	N	I	I	Y
Template Known Secondary structure		S	S					S										S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		1203	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	F	S	G	E	I	E	K	T	M	V	I	E	M	E	S	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	E	R	E	A	L	K	S	K	Y	V	E	F	K	E	E	G	V
Template Known Secondary structure											S								B
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D