Job Description A0JP43 Confidence 28.89% Date Tue Jul 30 13:08:59 BST 2013 Rank 101 Aligned Residues 79 % Identity 14% Template c1ydmC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:hypothetical protein yqgn; PDBTitle: x-ray structure of northeast structural genomics target sr44 Resolution 2.50 Å

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		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	K	W	L	H	Q	I	Q	Y	A	A	E	T	S	G	V	S	L	E	P	V	Y	T	E	T	F	R	V	L	T	Q	D	A	E	A	H	G	N	K	K	I	S	A	H	I	S	L	L	E	E	N	V	F	L	P	E	R	G	H
Query Conservation
Alig confidence																						.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		R	K	K	T	L	E	A	L	S	A	L	S	N	E	D	I	L	Q	K	T	.	.	.	E	R	X	Y	K	Y	L	F	S	L	P	E	W	Q	N	A	G	T	I	A	V	T	I	.	.	.	.	.	.	.	.	.	S	R	G	L	E
Template Known Secondary structure												S										.	.	.									T	S					S		S							.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																						.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.
		942	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	R	P	V	I	E	Q	A	W	E	E	G	K	Q	V	C	I	P	K	C	H	P	D	T	K	K	X	Q	F
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T										S	S	S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		54																							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D