Return to main results Retrieve Phyre Job Id

Job DescriptionA0JP43
Confidence96.70%DateTue Jul 30 13:08:59 BST 2013
Rank15Aligned Residues78
% Identity18%Templatec1vhmB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:protein yebr; PDBTitle: crystal structure of an hypothetical protein
Resolution2.10 Å
Model Dimensions (Å)X:36.439 Y:46.319 Z:26.036

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   968.970.........980.........990.........1000.........1010.........1020.......
Predicted Secondary structure 






























Query SS confidence 



























































Query Sequence  GISFTVVDEGKPIHVPQVQHHGNIFFWNSFRSKNEYNGSFLALPLQDAYMRIFGVLAVDT
Query Conservation                                                              
Alig confidence 






















......
















.












Template Conservation              
 
 
      ......         
 
 


 .      


 
  
Template Sequence  GVCGTAVARNQVQRIEDVHVFDG. . . . . . HIACDAASNSEIVLPLV. VKNQIIGVLDIDS
Template Known Secondary structure  TS
S
GGG
TT......

SS



S.TT
Template Predicted Secondary structure 









......










.


Template SS confidence 



























































   92.......100.........110.... .....120.........130. ........140....
 
   1028.1030.........1040.........1050......
Predicted Secondary structure 











Query SS confidence 




























Query Sequence  LRDPHEINIFLPHEIKFYQGVANAFSTAY
Query Conservation                               
Alig confidence 




....



















Template Conservation       ....
   
  

  

  

 

Template Sequence  TVFGR. . . . FTDEDEQGLRQLVAQLEKVL
Template Known Secondary structure  SSTT
....

Template Predicted Secondary structure 




....

Template SS confidence 




























   145.... 150.........160.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D