Phyre 2 alignment of A1L314 with c2ko5A_

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Job Description | A1L314
Confidence | 14.71% | Date | Wed Jul 10 14:33:54 BST 2013
Rank | 35 | Aligned Residues | 34
% Identity | 18% | Template | c2ko5A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:ring finger protein z; | PDBTitle: nmr solution structure of lfv-z
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 416 | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | H | L | L | S | Q | T | H | E | E | G | Y | S | R | L | E | C | K | K | K | C | T | L | K | I | F | C | K | T | V | C | E | D | V | F | R | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | S | L | I | P | D | A | . | . | T | H | L | G | P | Q | F | C | K | . | S | C | W | F | E | N | K | G | L | V | E | C | N | N | H | Y | L | C
Template Known Secondary structure |  |  | S |  | S | S | S |  | . | . |  |  | S |  |  |  |  |  |  | . | S | S |  | S |  |  | S | S |  |  |  |  | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 17 | . | . | 20 | . | . | . |  |  | . | . | . | . | . | . | 30 | . | . |  | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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