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Job DescriptionA1L314
Confidence54.63%DateWed Jul 10 14:33:54 BST 2013
Rank10Aligned Residues192
% Identity15%Templatec3ojyB_
PDB info PDB header:immune systemChain: B: PDB Molecule:complement component c8 beta chain; PDBTitle: crystal structure of human complement component c8
Resolution2.51 Å
Model Dimensions (Å)X:77.020 Y:59.400 Z:37.545

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160. ........170.........180.........190.
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Query Sequence  FQRMKTLQVKDQAVTTRVQVRNRIYTVKT. TPTSELSLGFTKALMDICDQLEKNQTKMAT
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Template Sequence  YIRRTKRFSHTKSVFLHARSDLEVAHYKLKPRSLMLHYEFLQRVKRLPLEY. . SYGEYRD
Template Known Secondary structure  TT
S



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B
TT

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   224.....230.........240.........250.........260.........270.... .....280.
 
   192.......200.........210.........220.........230.........240.........250.
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Query Sequence  YLAELLILNYGTHVITSVDAGAALVQEDHVRSSFLLDNQNSQNTVTASAGIAFLNIVNFK
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Template Sequence  L. . . . . FRDFGTHYITEAVLGGIYEYTLVMNKEAMERGDYTLNNVHACAKNDS. . . . . . V
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S

TTTT

TTT

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   282 .......290.........300.........310.........320......... 330
 
   252.......260.........270.........280.... .....290.........300.
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Query Sequence  VETDYISQTSLTKDYLSNRTNSRVQSFGGVPFY. . . . . . . . . . PGITLETWQKGITNHLV
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Template Sequence  GKCRGILNEIKDRNKRDMVEDLVVLVRGGASEHITTLAYQELPTADLMQEWGDAVQYNPA
Template Known Secondary structure  S

TTTTTTTT




S

STT




TSSS


S
TS
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   347..350.........360.........370.........380.........390.........400......
 
   302.......310.........320.........330.........340..
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Query Sequence  AIDRAGLPLHFFIKPDKLPGLPGPLVKKLSKTVETAVRHYY
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Template Sequence  IIKVKVEPLYELVTATDF. . . . . AYSSTVRQNMKQALEEFQ
Template Known Secondary structure  GGGG

TTT
.....TT
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   408.410.........420..... ....430.........440...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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