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Job DescriptionA1L314
Confidence99.16%DateWed Jul 10 14:33:54 BST 2013
Rank5Aligned Residues218
% Identity18%Templatec3kk7B_
PDB info PDB header:cell invasionChain: B: PDB Molecule:putative cell invasion protein with mac/perforin domain; PDBTitle: crystal structure of putative cell invasion protein with mac/perforin2 domain (np_812351.1) from bacteriodes thetaiotaomicron vpi-5482 at3 2.46 a resolution
Resolution2.46 Å
Model Dimensions (Å)X:66.905 Y:50.627 Z:37.571

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  EDGQYIIPDEVYTIPQKESNLEMNSEVLESWMNYQSTTSLSINTELALFSRVNGKFSTEF
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Template Sequence  RYPSYINPKELRT. TETKALSYSDFDRL. . . . EKNKTFTKTVKSGFSLNL. . . GPFKFGR
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GGG.SSTTGG....GTT
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   105....110....... ..120.........130. ........140......... 150......
 
   134.....140. ........150.........160...... ...170........
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Query Sequence  QRMKTLQV. . . . . . KDQAVTTRVQVRNRIYTVKTTPTSE. . . . . . . . . LSLGFTKALMDI
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Template Sequence  QKTIKETFVHNTDDSEKVVHGELSIEVVNGXLNLQTAPSALRKIAADYLDELFVDALYNS
Template Known Secondary structure  S





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   157..160.........170.........180.........190.........200.........210......
 
   179180.........190.........200.........210.........220.........230........
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Query Sequence  CDQLEKNQTKMATYLAELLILNYGTHVITSVDAGAALVQEDHVRSSFLLDNQNSQNTVTA
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Template Sequence  SXVE. . . . . . . . . . . . . . LXQSYGEFVLTGYYTGGRASALFYGVDTNSIQFDSKEKDXDV
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   217..220 .........230.........240.........250.........260..
 
   239240.........250.........260.........270...... ...280.... .
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Query Sequence  SAGIAFLNIVNFKVETDYISQTSLTKDYLSNRTNSRVQ. . SFGGVPFY. . . . . . . . . . . P
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Template Sequence  AINASYEWKGNLSIGTKRENSETITNKF. . . . SALSYSIKTLGGAYGYSISTPPYDITNY
Template Known Secondary structure  TS


S

TTTTTT....SSSSS

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   263......270.........280.........290 .........300.........310........
 
   286...290....... ..300. ........310.......
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Query Sequence  GITLETWQKGIT. . NHLV. . . AIDRAGLPLHFFIKPD
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Template Sequence  SIDLTPWLQSLNDPKTHTXIDLQDGGLYPISDFILEE
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TTSGGG

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   334.....340.........350.........360.........370
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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