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Job DescriptionA1L314
Confidence27.04%DateWed Jul 10 14:33:54 BST 2013
Rank13Aligned Residues57
% Identity18%Templatec1ihmC_
PDB info PDB header:virusChain: C: PDB Molecule:capsid protein; PDBTitle: crystal structure analysis of norwalk virus capsid
Resolution3.40 Å
Model Dimensions (Å)X:36.963 Y:49.444 Z:22.931

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   558.560..... ....570.........580.........590.........600 .........610
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Query Sequence  FSQHLAVI. . . . SDGCQVSYCVKAGIFTGGSLLPVRLPPYTKPPLMS. . . QVATNTVIVT
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Template Sequence  FLLHLSQMYNGWVGNMRVRIMLAGNAFTAGKIIVSCIPPGFGSHNLTIAQATLFPH. VIA
Template Known Secondary structure  TTBS



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   3092.......3100.........3110.........3120.........3130.........3140....... ..3150
 
   611....
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Query Sequence  NSETA
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Template Sequence  DVRTL
Template Known Secondary structure  TT

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   3151....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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