Phyre 2 alignment of A1L314 with c3m9zA_

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Job Description | A1L314
Confidence | 9.03% | Date | Wed Jul 10 14:33:54 BST 2013
Rank | 67 | Aligned Residues | 29
% Identity | 17% | Template | c3m9zA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:killer cell lectin-like receptor subfamily b member 1a; | PDBTitle: crystal structure of extracellular domain of mouse nkr-p1a
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 407 | . | . | 410 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | S | C | P | P | G | Y | S | P | V | . | . | . | . | . | H | L | L | S | Q | T | H | E | E | G | Y | S | R | L | E | C | K | K | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | E | C | P | Q | D | W | L | S | H | R | D | K | C | F | H | V | S | Q | V | S | N | T | W | E | E | G | L | V | D | C | D | G | K
Template Known Secondary structure |  |  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |  |  | S | S |  | B |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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