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Job DescriptionA1L314
Confidence99.89%DateWed Jul 10 14:33:54 BST 2013
Rank4Aligned Residues275
% Identity15%Templatec2qp2A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:unknown protein; PDBTitle: structure of a macpf/perforin-like protein
Resolution2.00 Å
Model Dimensions (Å)X:70.252 Y:62.602 Z:36.910

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.. .......60..... ....70.. ..... ..80.
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Query Sequence  CKNALKLPVLEVLPGGGWD. . . . . NLRNVDMGRVMDL. . TYTNCKT. . . . TEDGQ. YIIP
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Template Sequence  LFDDTVIAGAE. MIGTSYDVFGKYCNVGSCMNSLFDERKINASEDNFKKVTILGKTLKVP
Template Known Secondary structure  T

TTB
TTGG.GTT
TTSSSS
GGG
B
T
GGGTT
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   32.......40.. .......50.........60.........70.........80.........90
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  DEVYTIPQKESNLEMNSEVLESWMNYQSTTSLSINTELALFSRVNGKFSTEFQRMKTLQV
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Template Sequence  YYIDCYSV. . GDLKYTNASGESIESYQSNISSKSRIKGNYLF. . . FSASLKVDFDTDSLT
Template Known Secondary structure  TT
..SSTT

SSS

T...TTTS
TGGGG
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   91....... .100.........110.........120.........130 .........140.....
 
   142.......150.........160.... .....170.........180.........190........
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Query Sequence  KDQAVTTRVQVRNRIYTVKTTPT. . . SELSLGFTKALMDICDQLEKNQTKMATYLAELLI
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Template Sequence  DFENAFSRIQYTYDLYILKSSAEALKEFLKESVKTALDKADTEE. . . . . . . . DMND. . LF
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TT

GGGB


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   146...150.........160.........170.........180......... 190... ..
 
   199200.........210.........220.........230.........240.........250........
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Query Sequence  LNYGTHVITSVDAGAALVQEDHVRSSFLLDNQNSQNTVTASAGIAFLNIVNFKVETDYIS
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Template Sequence  NTWGSHFLSGVVMGGCAQYSSSTNKY. . . . TSNLTNSFDVVAAASFAGFIGLSARTGNSF
Template Known Secondary structure  T
S
TT....TS

SS
TT




TTT
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   196...200.........210.........220. ........230.........240.........250.
 
   259260.........270.........280.... .... .290........
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Query Sequence  QTSLTKDYLSNRTNSRVQSFGGVPFY. . . . . . . . PGIT. . . . . . . . . . . . LETWQKGITN
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Template Sequence  MEDIKK. . FRSASNIKTHAIGGDLSRFDPFGGATSADQPSAEEIAAAKKAFEDWKASVPN
Template Known Secondary structure  ..TSS
TTT

TTTT



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STT
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   252..... ..260.........270.........280.........290.........300.........
 
   299300...... ...310.........320.........330.........340.
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Query Sequence  HLVAIDRA. . . . GLPLHFFIKPDKLPGLPGPLVKKLSKTVETAVRHY
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Template Sequence  APELVNFADSNPLTGIWELCSDRTQ. . . . . . . . . . . KAKLKKHFETV
Template Known Secondary structure  S

SS

GGGG
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   310.........320.........330.... .....340.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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