Job Description A2A4P0 Confidence 99.93% Date Wed Jul 10 14:06:11 BST 2013 Rank 25 Aligned Residues 239 % Identity 17% Template d1yksa2 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase Resolution 1.80

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		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M	Q	T	R	I	F	D	P	A
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	A	D	K	R	P	T	A	W	F	L	P	S	I	R	A	A	N	V	M	A	A	S	L	R	K	A	.	.	.	.	.	.	.	.	.	G	K	S	V	V	V	L	N	R	K	T	F	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S							S															T	.	.	.	.	.	.	.	.	.	T								S	S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390	.	.	.	.	.	.
		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.		.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	.	V	K	Q	K	V	Y	N	S	K	T	G	I	D	Q	L	V	V	T	P	I	S	Q	A	Q	A	K	Q	R
Query Conservation																																	.
Alig confidence		.	.																			.											.
Template Conservation		.	.																			.
Template Sequence		.	.	K	K	P	D	F	I	L	A	T	D	I	A	E	M	G	A	N	L	.	C	V	E	R	V	L	D	C	R	T	A	F	K	P	V	L	V	D	E	G	R	K	V	A	I	K	G	P	L	R	I	S	A	S	S	A	A	Q	R
Template Known Secondary structure		.	.				S					S	S	S	T	T			T	T		.			S															T	T	T	T
Template Predicted Secondary structure		.	.																			.
Template SS confidence
				405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		912	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	A	G	R	T	G	P	G	K	C	Y	R	L	Y	T	E	R	A	Y	R	D	E	M	L	T	T	N	V	P	E	I	Q	R	T	N	L	A	S	T	V	L	S	L	K	A	M	G	I	N	D	L	L	S	F	D	F	M	D
Query Conservation
Alig confidence											.	.	.	.									.
Template Conservation											.	.	.	.									.
Template Sequence		R	G	R	I	G	R	N	P	N	.	.	.	.	R	D	G	D	S	Y	Y	Y	.	S	E	P	T	S	E	N	N	A	H	H	V	C	W	L	E	A	S	M	L	L	D	N	M	E	V	R	G	G	M	V	A	P	L	Y	G	V	E
Template Known Secondary structure			T	T	S	S			T	T	.	.	.	.									.		S							T	T	B											T	T	S			G	G	G						S	T	T
Template Predicted Secondary structure											.	.	.	.									.
Template SS confidence
		462	.	.	.	.	.	.	.	470					.	.	.	.	.	.	.	.		.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		972	.						.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		A	P	.	.	.	.	.	P	M	E	T	L	I	T	A	M	E	Q	L	Y	T	L	G	A	L	D	D	E	G	L	L	T	R	L	G	R	R	M	A	E	F	P	L	E	P	M	L	C	K	M	L	I	M	S	V	H	L	G	C	S
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		G	T	K	T	P	V	S	P	G	E	M	R	L	R	D	D	Q	R	K	V	F	R	E	L	V	R	N	C	D	L	P	V	W	L	S	W	Q	V	A	K	A	G	L	K	T	N	D	R	K	W	C	F	E	G	P	E	E	H	E	I
Template Known Secondary structure					S	S	S		T	T	T	T																T	T													T	T			T	T			G	G	G	S		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
		1027	.						.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		E	E	.	.	.	.	.	M	L	T	I	V	S	M	L	S	V	Q	N	V	F	Y	R	P	K	D	K	Q	A	L	A	D	Q	K	K	A	K
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		L	N	D	S	G	E	T	V	K	C	R	A	P	G	G	A	K	K	P	L	R	P	R	W	C	D	E	R	V	S	S	D	Q	S	A	L	S
Template Known Secondary structure		B		T	T	S		B						T	T	S								S	S			G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D