Job Description A2A4P0 Confidence 94.53% Date Wed Jul 10 14:06:11 BST 2013 Rank 311 Aligned Residues 147 % Identity 17% Template c4idhA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:gene 2 protein; PDBTitle: crystal structure of the large terminase subunit gp2 of bacterial2 virus sf6 Resolution 1.69 Å

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		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	.	S	V	A	K	R	V	S	E	E	F
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		P	F	I	E	A	H	R	Y	K	V	A	K	G	G	R	G	S	G	K	S	W	A	I	A	R	L	L	V	E	A	A	R	R	Q	P	V	R	I	L	C	A	R	E	L	Q	N	S	I	S	D	S	V	I	R	L	L	E	D	T	I
Template Known Secondary structure		G	G	T	S			S								T	T																T	T	S									S			S	S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.			.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	.	.	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I
Query Conservation																				.	.
Alig confidence			.																	.	.																					.	.	.																.	.
Template Conservation			.																																							.	.	.																.	.
Template Sequence		E	.	R	E	G	Y	S	A	E	F	E	I	Q	R	S	M	I	R	H	L	G	T	N	A	E	F	M	F	Y	G	I	K	N	N	P	T	K	I	K	S	.	.	.	L	E	G	I	D	I	C	W	V	E	E	A	E	A	V	.	.
Template Known Secondary structure			.			T		G	G	G					T	T					T	T	T									T	T	T								.	.	.											S	G	G	G		.	.
Template Predicted Secondary structure			.																																							.	.	.																.	.
Template SS confidence
		70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	V	K	F	S	Q	Y	F
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	T	K	E	S	W	D	I	L	I	P	T	I	R	K	P	F	S	E	I	W	V	S	F	N	P	K	N	I	L	D	D	T	Y	Q	R	F
Template Known Secondary structure		.									G	G	G			S	T	T											B	T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D