Job Description A2A4P0 Confidence 99.73% Date Wed Jul 10 14:06:11 BST 2013 Rank 45 Aligned Residues 315 % Identity 16% Template c4ddvA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:reverse gyrase; PDBTitle: thermotoga maritima reverse gyrase, triclinic form Resolution 3.46 Å

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		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	E	Q	R	E	S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		S	F	F	K	K	K	F	G	K	D	L	T	G	Y	Q	R	L	W	A	K	R	I	V	Q	G	K	S	F	T	M	V	A	P	T	G	V	G	K	T	T	.	F	G	M	M	T	A	L	W	L	A	R	K	G	K	K	S	A	L	V
Template Known Secondary structure								S	S	S														T	T	T								S	T	T						.											T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.											.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	.	.	.	.	.	.	.	.	.	.	S	P	E	T	V	I	K	Y	M	T	D	G	M	L
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																		.					.															.	.	.	.	.	.	.	.	.	.
Template Conservation																		.					.
Template Sequence		F	P	T	V	T	L	V	K	Q	T	L	E	R	L	Q	K	.	L	A	D	E	.	K	V	K	I	F	G	F	Y	S	S	M	K	K	E	E	K	E	K	F	E	K	S	F	E	E	D	D	Y	H	I	L	V	F	S	T	Q	F	V
Template Known Secondary structure			S	S													T	.	T	S		T	.	T	S							T	T			T	T											T	S			S
Template Predicted Secondary structure																		.					.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.															.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence										.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Template Conservation										.
Template Sequence		S	K	N	R	E	K	L	S	.	Q	K	R	F	D	F	V	F	V	D	D	V	D	A	V	L	K	A	S	R	N	I	D	T	L	L	M	M	V	G	I	P	E	E	I	I	R	K	A	F	S	T	I	K	Q	G	K	I	Y	E	R
Template Known Secondary structure				S						.	T	S			S					S						T	T	S	S									T	S	S																T	S
Template Predicted Secondary structure										.
Template SS confidence
		186	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
						733	.	.	.	.	.	.	740	.	.	.	.	.					.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.
Query SS confidence		.	.	.	.														.	.	.	.
Query Sequence		.	.	.	.	Q	D	M	K	L	I	V	T	S	A	T	L	D	.	.	.	.	A	V	K	F	S	Q	Y	F	Y	E	A	P	I	F	T	I	P	G	R	T	Y	P	V	E	I	L	Y	T	K	E	P	E	T	D	Y	L	D	A	S
Query Conservation		.	.	.	.														.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		P	K	N	L	K	P	G	I	L	V	V	S	S	A	T	A	K	P	R	G	I	R	P	L	L	F	R	D	L	L	N	F	T	V	G	R	L	V	S	V	A	R	N	I	T	H	V	R	I	S	S	R	S	K	E	K	L	V	E	L
Template Known Secondary structure			S	S											B	S	S				S	S	T	T							T	S					B														S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		L	E	I	F	.	.	.	.	.	.	.	.	R	D	G	I	L	I	F	A	Q	T	E	E	E	G	K	E	L	Y	E	Y	L	K	R	F	.	.	.	.	.	.	.	.	.	K	F	N	V	G	E	T	W	S	E	.	.	.	.	.
Template Known Secondary structure						.	.	.	.	.	.	.	.		S	S						S	S														T	.	.	.	.	.	.	.	.	.	T						S	S	S	S	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		305	.	.	.									.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.										.	.	.	.	.	.	.	340	.	.
		845	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.					.	.	.	.	.	.	.	870	.	.	.	.		.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.													.																									.
Query SS confidence																				.	.	.	.													.																									.
Query Sequence		Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	.	.	.	.	T	N	I	A	E	T	S	L	T	I	D	G	.	I	Y	Y	V	V	D	P	G	F	V	K	Q	K	V	Y	N	S	K	T	G	I	D	Q	L	.
Query Conservation																				.	.	.	.													.																									.
Alig confidence																				.	.	.	.													.																									.
Template Conservation
Template Sequence		F	E	K	N	F	E	D	F	K	V	G	K	I	N	I	L	I	G	V	Q	A	Y	Y	G	K	L	T	R	G	V	D	L	P	E	R	I	K	Y	V	I	F	W	G	T	P	S	M	R	F	S	L	E	L	D	K	A	P	R	F	V
Template Known Secondary structure												T	S		S						T	T	T					T	S	S				T	T	T								S									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
																																																							899	900	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	T	P	I	S	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	R	V	L	K	E	M	G	L	I	K	A	Q	E	N	P	D	V	E	E	L	R	K	I	A	K	E	H	L	T	Q	K	E	F	V	E	K	V	K	E	M	F	R	G	V	V	V	K	D	E	D	L	E	L	I	I	P	D	V
Template Known Secondary structure										T				S	S												T	T	S	S																S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		906	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	K	Q	R	A	G	R	A	G	R	T	G	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	Y	I	Q	A	S	G	R	S	S	R	I	L	N	G
Template Known Secondary structure										T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.