Job Description A2A4P0 Confidence 95.90% Date Wed Jul 10 14:06:11 BST 2013 Rank 257 Aligned Residues 148 % Identity 21% Template c4akgB_ PDB info PDB header:motor protein Chain: B: PDB Molecule:glutathione s-transferase class-mu 26 kda isozyme, dynein PDBTitle: dynein motor domain - atp complex Resolution 3.30 Å

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		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	H	E	K	I	F	Y	D	L	L	N	S	K	R	G	I	I	L	C	G	P	P	G	S	G	K	T	M	I	M	N	N	A	L	R	N	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T									T	T	S	S													S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2399	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.	2430	.	.	.	.	.	.
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.															.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	Y	D	V	V	G	I	N	F	S	K	D	T	.	.	.	.	.	.	.	.	.	T	T	E	H	I	L	S	A	L	H	R	H	T	N	Y	V	T	T	S	K	G	L	T	L	L	P	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S										T	T		.	.	.	.	.	.	.	.	.											T	T	B						T	T	T						B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
													2437	.	.	2440	.	.	.	.	.	.	.	.	.										2450	.	.	.	.	.	.	.	.	.	2460	.	.	.	.	.	.	.	.	.	2470	.	.	.	.	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.				.	.	720	.	.	.	.	.	.	.	.	.	730	.	.														.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure																					.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	.	.	.	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	M	K	L	I	V	T	S	A
Query Conservation																					.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	I	K	N	L	V	L	F	C	D	E	I	N	L	P	K	L	D	K	Y	G	S	Q	N	V	V	L	F	L	R	Q	L	M	E	K	Q	G	F	W	K	T	P	E	N	K	W	V	T	I	E	R	I	H	I	V	G	A	C	N
Template Known Secondary structure		S	S	S	S								T	T	T		S				S	S	S														T	S					T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		2477	.	.	2480	.	.	.	.	.	.	.	.	.	2490	.	.	.	.	.	.	.	.	.	2500	.	.	.	.	.	.	.	.	.	2510	.	.	.	.	.	.	.	.	.	2520	.	.	.	.	.	.	.	.	.	2530	.	.	.	.	.	.
		743	.	.								.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.
Query Sequence		T	L	D	.	.	.	.	.	.	.	A	V	K	F	S	Q	Y	F	Y	E	A	P	I	F	T	I	P	G	R	T	Y	P	V	E	I	L	Y	T	K	E	P	E	T	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E
Query Conservation					.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	P	T	D	P	G	R	I	P	M	S	E	R	F	T	R	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	L	Y	L	G	Y	P	S	G	K	S	L	S	Q	I	Y	E	I	Y	Y	K	A	I	F	K	L
Template Known Secondary structure			T	T	S	T	T										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T														T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2537	.	.	2540	.	.	.	.	.	.	.	.	.	2550	.	.	.	.																.	.	.	.	.	2560	.	.	.	.	.	.	.	.	.	2570	.	.	.	.	.	.	.	.	.	2580	.
		796	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P
Template Known Secondary structure			G
Template Predicted Secondary structure
Template SS confidence
		2582	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D