Job Description A2A4P0 Confidence 96.76% Date Wed Jul 10 14:06:11 BST 2013 Rank 199 Aligned Residues 151 % Identity 13% Template c4a1fB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of c-terminal domain of helicobacter2 pylori dnab helicase Resolution 2.50 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		F	V	Q	L	D	N	Y	T	S	G	F	N	K	G	S	L	V	I	I	G	A	R	P	S	M	G	K	T	S	L	M	M	N	M	V	L	S	A	L	.	N	D	D	R	G	V	A	V	F	S	L	E	M	S	A	E	Q	L	A	L
Template Known Secondary structure										T	S	B		T	T									T	T	S															.		S	S								S	S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		R	A	L	S	D	L	T	S	I	N	M	H	D	L	E	S	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	D	D	Q	W	E	N	L	A	K	C	F	D	H	L	S	Q	K	K	L	F	F	Y	D	K	.
Template Known Secondary structure									T									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			S								.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.																260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		712	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740		.	.	.	.	.	.	.	.	.	750	.	.	.							.	.	.	.	.	.	760	.
Predicted Secondary structure																															.														.	.	.	.	.	.
Query SS confidence																															.														.	.	.	.	.	.
Query Sequence		H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	.	S	A	T	L	D	A	V	K	F	S	Q	Y	F	.	.	.	.	.	.	Y	E	A	P	I	F	T	I
Query Conservation																															.														.	.	.	.	.	.
Alig confidence		.	.																												.														.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	S	Y	V	R	I	E	Q	I	R	L	Q	L	R	K	L	K	S	Q	H	K	E	L	G	I	A	F	I	D	Y	L	Q	L	Q	I	A	E	I	S	R	E	L	K	T	L	A	R	E	L	E	I	P	I	I	A	L
Template Known Secondary structure		.	.	S																			T	T																												T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D