Job Description A2A4P0 Confidence 96.10% Date Wed Jul 10 14:06:11 BST 2013 Rank 241 Aligned Residues 106 % Identity 15% Template c3zw6B_ PDB info PDB header:photosynthesis Chain: B: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase activase 1, PDBTitle: model of hexameric aaa domain arrangement of green-type2 rubisco activase from tobacco. Resolution 20.00 Å

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		593	.	.	.	.	.	.	600	.	.	.	.	.	.											.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	.	.	.	.	.	.	.	.	.	.	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	F	M	D	K	L	V	V	H	I	T	K	N	F	L	K	L	P	N	I	K	V	P	L	I	L	G	I	W	G	G	K	G	Q	G	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	S			T	T					S								T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	.	.	.	.
Query Conservation																																																										.	.	.	.
Alig confidence		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	Q	C	E	L	V	F	R	K	M	G	I	N	P	I	M	M	S	A	G	E	L	E	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	P	A	K	L	I	R	Q	R	Y	R	E	A	A	E	I	I
Template Known Secondary structure		.	.	.	.	.	.											T																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.													.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.		.	.	.	.	740	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	.	K	L	I	V	T	S	A	T
Query Conservation																																							.
Alig confidence																.	.	.	.																				.
Template Conservation																.	.	.	.
Template Sequence		R	K	G	N	M	C	C	L	F	I	N	D	L	D	.	.	.	.	N	N	Q	M	V	N	A	T	L	M	N	I	A	D	N	P	T	E	N	A	R	V	P	I	I	V	T	G
Template Known Secondary structure		T	T	S	S											.	.	.	.
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D