Job Description A2A4P0 Confidence 97.48% Date Wed Jul 10 14:06:11 BST 2013 Rank 173 Aligned Residues 106 % Identity 22% Template c3vkwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:replicase large subunit; PDBTitle: crystal structure of the superfamily 1 helicase from tomato mosaic2 virus Resolution 1.90 Å

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		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G
Query Conservation
Alig confidence																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		S	A	K	V	V	L	V	D	G	V	P	G	C	G	K	T	K	E	I	L	S	R	V	.	.	.	.	.	.	N	F	E	E	D	L	I	L	V	P	G	R	Q	A	A	E	M	I	R	R	R	A	N	.	.	.	.	.	.	.	.
Template Known Secondary structure			S									T	T	S											.	.	.	.	.	.		T	T	T						S													T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.							.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.		.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	.	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F
Query Conservation																									.
Alig confidence		.	.	.	.	.	.	.	.	.															.														.	.																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																													.	.																.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	A	S	G	I	I	V	A	T	K	D	N	V	R	T	V	D	S	F	L	M	N	Y	G	K	G	A	R	C	.	.	Q	F	K	R	L	F	I	D	E	G	L	M	L	H	T	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	T	S						T	T	T										T	T	T	S	S				.	.			S						T	G	G	G	S			.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																													.	.																.	.	.	.	.	.
Template SS confidence
											871	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.			.	900	.	.	.	.	.	.	.	.	.	910	.	.	.
		723	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	V	N	F	L	V	E	M	S	L	C	D	I	A	Y	V	Y
Template Known Secondary structure											T	T		S
Template Predicted Secondary structure
Template SS confidence
		914	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D