Job Description A2A4P0 Confidence 96.13% Date Wed Jul 10 14:06:11 BST 2013 Rank 239 Aligned Residues 89 % Identity 21% Template c3vfdA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:spastin; PDBTitle: human spastin aaa domain Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	F	G	P	P	G	N	G	K	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	A	V	A	A	E	S	N	A	T	F	F	N	I	S	A
Template Known Secondary structure						S	S	T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T								S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390																														.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		668	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	K	L	V	R	A	L	F	A	V	A	R	E	L	Q	P	S	I	I	F	I	D	Q	V	D	S	L	L	D	A	S	R	R	L	K	T	E	F	L	I
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S	S							T	G	G	G	G			T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		409	410	.																	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		728	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Q	K	R	Q	D	M	K	L	I	V	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	D	G	V	Q	R	V	L	V	M	G	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.	.	.	.	.	.	.	.	.	480	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D