Job Description A2A4P0 Confidence 97.00% Date Wed Jul 10 14:06:11 BST 2013 Rank 187 Aligned Residues 148 % Identity 14% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.											.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	K	K	T	Q	M	S	I	L	E	Q	R	E	S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	.	.	.	.	.	.	.	.	.	.	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.
Template Sequence		N	L	E	E	S	I	R	E	S	L	Q	K	R	E	L	L	K	.	.	.	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N
Template Known Secondary structure																			.	.	.																			T	T												S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550				.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		624	.	.	.	.						.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		Q	Y	L	A	E	.	.	.	.	.	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	T	T	T	S	S										T	T															S						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	.	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L
Query Conservation																							.
Alig confidence		.	.	.	.	.	.																.													.
Template Conservation		.	.	.	.	.	.																													.
Template Sequence		.	.	.	.	.	.	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	.	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	S	K	L	S	I
Template Known Secondary structure		.	.	.	.	.	.													S		G	G	G	S											.	S	S	S			T													S	S
Template Predicted Secondary structure		.	.	.	.	.	.																													.
Template SS confidence
								641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.		.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
		738	.	740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	S	A	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	C	V	G	G	H	N	V
Template Known Secondary structure							S	S
Template Predicted Secondary structure
Template SS confidence
		694	.	.	.	.	.	700	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D