Job Description A2A4P0 Confidence 92.70% Date Wed Jul 10 14:06:11 BST 2013 Rank 393 Aligned Residues 125 % Identity 19% Template c3k1jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1 Resolution 2.00 Å

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		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		H	A	V	E	V	I	K	T	A	A	N	Q	K	R	H	V	L	L	I	G	E	P	G	T	G	K	.	S	M	L	G	Q	A	M	A	E	L	L	P	T	E	T	L	E	D	I	L	V	F	P	N	P	E	D	E	N	M	P	R	I
Template Known Secondary structure													T	T									T	T	S	S		.										T	S			S	S										T	T		T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
					640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																																.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																																																.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																																																.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																														.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		K	T	V	P	A	C	Q	G	R	R	I	V	E	K	Y	R	E	K	A	K	S	Q	E	S	V	L	V	P	K	L	L	V	.	.	.	.	D	N	C	G	R	T	K	A	P	F	I	D	A	T	G	A	H	A	G	A	L	L	G	D
Template Known Secondary structure						T	T																	T										.	.	.	.			T	T		S	S							T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
																		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.															.	.
Template Conservation																							.	.	.	.	.	.	.	.															.	.
Template Sequence		V	R	H	D	P	F	L	G	T	P	A	H	E	R	V	E	P	G	M	I	H	.	.	.	.	.	.	.	.	R	A	H	K	G	V	L	F	I	D	E	I	A	T	.	.	L	S	L	K	M	Q	Q	S	L	L	T	A	M	Q	E
Template Known Secondary structure												G	G	G	G								.	.	.	.	.	.	.	.		T	T	T	S					T	T	G	G	G	.	.	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.															.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		731	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		265	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D