Job Description A2A4P0 Confidence 96.39% Date Wed Jul 10 14:06:11 BST 2013 Rank 226 Aligned Residues 121 % Identity 12% Template c3iytG_ PDB info PDB header:apoptosis Chain: G: PDB Molecule:apoptotic protease-activating factor 1; PDBTitle: structure of an apoptosome-procaspase-9 card complex Resolution 9.50 Å

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		596	.	.	.	600	.	.	.	.	.	.					.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.				.	.	.	630	.	.	.	.	.	.	.	.				.	640	.	.	.	.	.
Predicted Secondary structure													.	.	.	.																					.	.	.													.	.	.
Query SS confidence													.	.	.	.																					.	.	.													.	.	.
Query Sequence		E	Q	L	V	Q	A	V	H	D	N	Q	.	.	.	.	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	.	.	.	A	E	A	G	Y	T	S	R	G	K	I	G	.	.	.	C	T	Q	P	R	R	V
Query Conservation													.	.	.	.																					.	.	.													.	.	.
Alig confidence													.	.	.	.																					.	.	.													.	.	.
Template Conservation
Template Sequence		N	A	I	Q	Q	K	L	S	K	L	K	G	E	P	G	W	V	T	I	H	G	M	A	G	C	G	K	S	V	L	A	A	E	A	V	R	D	H	S	L	L	E	G	C	F	P	G	G	V	H	W	V	S	V	G	K	Q	D	K	S
Template Known Secondary structure									T	T	S	T	T	S										T	T	S	S																				T	T									S
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		G	L	L	M	K	L	Q	N	L	C	T	R	L	D	Q	D	E	S	F	S	Q	R	L	P	L	N	I	E	E	.	.	.	.	.	.	.	.	.	.	.	.	A	K	D	R	L	R	I	L	M	L	R	K	H	P	R	.	.	S	L
Template Known Secondary structure																S	S			S		S	S				S				.	.	.	.	.	.	.	.	.	.	.	.												T		T	T	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.													.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	L	D	D	V	W	D	.	.	.	.	.	.	.	.	.	.	.	S	W	V	L	K	A	F	D	S	Q	C	Q	I	L	L	T	T
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.						T	T		S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D