Job Description A2A4P0 Confidence 98.80% Date Wed Jul 10 14:06:11 BST 2013 Rank 113 Aligned Residues 187 % Identity 21% Template c3earA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hera; PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer Resolution 2.30 Å

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		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	I	L	Y	T	K	E	P	E	T	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D
Query Conservation
Alig confidence																							.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		Y	E	E	E	A	V	P	A	P	V	R	G	R	L	E	V	L	S	D	L	L	.	.	.	.	Y	V	A	S	P	D	R	A	M	V	F	T	R	T	K	A	E	T	E	E	I	A	Q	G	L	L	R	L	.	.	.	.	.	.	.
Template Known Secondary structure		S									G	G	G										.	.	.	.						S	S						S	S														T	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	V	K	Q	K
Query Conservation
Alig confidence		.	.																																																							.	.	.	.
Template Conservation		.	.																																																							.	.	.	.
Template Sequence		.	.	G	H	P	A	Q	A	L	H	G	D	L	S	Q	G	E	R	E	R	V	L	G	A	F	R	Q	G	E	V	R	V	L	V	A	T	D	V	A	A	R	G	L	D	I	P	Q	V	D	L	V	V	H	Y	R	L	.	.	.	.
Template Known Secondary structure		.	.	T								T	T	S															T	S								T	T	T	T		S	S		S			B	S					S	S		.	.	.	.
Template Predicted Secondary structure		.	.																																																							.	.	.	.
Template SS confidence
				262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		888	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.									.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.
Query Sequence		V	Y	N	S	K	T	G	I	D	Q	L	V	V	T	P	I	S	Q	A	Q	A	K	Q	R	A	G	R	A	G	R	T	G	P	G	K	C	Y	R	L	Y	T	E	R	A	Y	R	.	.	.	.	.	.	.	.	D	E	M	L	T	T
Query Conservation																																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	R	A	E	A	Y	Q	H	R	S	G	R	T	G	R	G	G	R	V	V	L	L	Y	G	P	R	E	R	R	D	V	E	A	L	E	R	A	V	G	R	R	F	K	R	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S									T	T	B												G	G	G												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		940	.	.				.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.						.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.
Predicted Secondary structure					.	.	.																										.	.	.	.	.
Query SS confidence					.	.	.																										.	.	.	.	.
Query Sequence		N	V	P	.	.	.	E	I	Q	R	T	N	L	A	S	T	V	L	S	L	K	A	M	G	I	N	D	L	L	S	F	.	.	.	.	.	D	F	M	D	A	P	P	M	E	T	L	I	T	A	M	E	Q	L
Query Conservation					.	.	.																										.	.	.	.	.
Alig confidence					.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence		N	P	P	T	P	E	E	V	L	E	A	K	W	R	H	L	L	A	R	L	A	R	V	P	E	K	D	Y	R	L	Y	Q	D	F	A	G	R	L	F	A	E	G	R	V	E	V	V	A	A	L	L	A	L	L
Template Known Secondary structure																								S							T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D