Job Description A2A4P0 Confidence 98.45% Date Wed Jul 10 14:06:11 BST 2013 Rank 141 Aligned Residues 138 % Identity 17% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		603	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.		.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	.	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E
Template Known Secondary structure		S	S										T	T	S																T	T											S																T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L
Query Conservation
Alig confidence			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		I	.	.	.	.	.	V	V	A	E	K	A	K	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	.	R	L	H	T	N	Y	S	L
Template Known Secondary structure			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.												T	T		S									.		S	S
Template Predicted Secondary structure			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		222						.	.	.	.	.	.	.	230	.	.													.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.
		722	.	.	.	.	.	.	.	730								.	.	.	.	.	.	.	.	.	740	.	.	.	.				.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.															.	.	.
Query SS confidence											.	.	.	.	.	.	.															.	.	.
Query Sequence		F	G	L	L	K	K	T	V	Q	.	.	.	.	.	.	.	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	.	.	.	D	A	V	K	F	S	Q	Y	F	Y	E	A	P	I
Query Conservation											.	.	.	.	.	.	.															.	.	.
Alig confidence											.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I
Template Known Secondary structure														T	T	S	T	T			S								G	G	G	G	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D