Job Description A2A4P0 Confidence 99.02% Date Wed Jul 10 14:06:11 BST 2013 Rank 90 Aligned Residues 168 % Identity 16% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		K	K	T	Q	M	S	I	L	E	Q	R	E	S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	.	.	.	.
Query Conservation																																																										.	.	.	.
Alig confidence																																																										.	.	.	.
Template Conservation
Template Sequence		E	E	N	V	A	A	R	A	S	P	E	P	E	L	Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	E	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	K
Template Known Secondary structure									T			S																		T	T								S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
			632	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.			.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																									.	.
Query SS confidence		.																																									.	.
Query Sequence		.	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	.	.	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G
Query Conservation		.																																									.	.
Alig confidence		.																																									.	.
Template Conservation
Template Sequence		A	S	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q	P	F	L	K	K	W	Y	R	V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	S	C	D	I	I	I	S	T	A	Q
Template Known Secondary structure		T	T										S	S											T						T	T	T	S																				S
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.							.	.	.	.	740	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	.	.	.	.	.	.	K	L	I	V	T	S	A
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	E	N	S	L	L	N	G	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R	H	Y	L	M	Q	K	L	K	N	N	R	L	K	K	E	N	K	P	V	I	P	L	P	Q	I	L	G	L	T	A
Template Known Secondary structure													G	G	G		S					T	T																							T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		743
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D