Job Description A2A4P0 Confidence 95.90% Date Wed Jul 10 14:06:11 BST 2013 Rank 255 Aligned Residues 218 % Identity 19% Template c2zpaB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uncharacterized protein ypfi; PDBTitle: crystal structure of trna(met) cytidine acetyltransferase Resolution 2.35 Å

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		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.			.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	.	.	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V
Query Conservation																					.	.
Alig confidence																					.	.																									.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		T	G	A	P	Q	P	E	Q	Q	Q	L	L	K	Q	L	X	T	X	P	P	G	V	A	A	V	T	A	A	R	G	R	G	K	S	A	L	A	G	Q	L	I	S	R	I	A	.	.	.	.	G	R	A	I	V	T	A	P	A	K	A
Template Known Secondary structure			S	S									T	T	T	S					S	S								T	T	S	S								T	T	T	T	S	S	.	.	.	.	S					B		S	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.					.	.	220	.	.	.	.	.	.	.	.
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		S	T	D	V	L	A	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	K	F	R	F	I	A	P	D	A	L	L	A	.	.	.	.	.	.	S	D	E	Q	A	D	W
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	S										T	T	.	.	.	.	.	.	T					S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.																									.	.	.	240	.	.	.	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.
		706	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.										.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.
Query Sequence		I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	.	.	.	.	.	.	.	.	.	A	V	K	F	S	Q	Y	F	Y	E	A
Query Conservation																																										.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																.	.	.											.	.	.	.	.	.	.	.	.											.
Template Conservation								.	.	.	.	.	.																.	.	.																														.
Template Sequence		L	V	V	D	E	A	.	.	.	.	.	.	A	A	I	P	A	P	L	L	H	Q	L	V	S	R	F	.	.	.	P	R	T	L	L	T	T	T	V	Q	G	Y	E	G	T	G	R	G	F	L	L	K	F	C	A	R	F	P	H	.
Template Known Secondary structure					T	T	G	.	.	.	.	.	.	G	G	S												S	.	.	.	S									S	S	T	T												T	T	S	T	T	.
Template Predicted Secondary structure								.	.	.	.	.	.																.	.	.																														.
Template SS confidence
		259	260	.	.	.	.							.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.					.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.					.	.	.	800	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																					.	.	.	.
Query SS confidence																						.	.	.	.																					.	.	.	.
Query Sequence		P	I	F	T	I	P	G	R	T	Y	P	V	E	I	L	Y	T	K	E	P	.	.	.	.	E	T	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	.	.	.	.	P	G	D	I	L	V	F	L	T	G	Q	E
Query Conservation																						.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	H	R	F	E	L	Q	Q	P	I	R	W	A	Q	G	C	P	L	E	K	X	V	S	E	A	L	V	F	D	D	E	N	F	T	H	T	P	Q	G	N	I	V	I	S	A	F	E	Q	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.								S		S	S	S		T	T												T				T	T	T	T	S				S									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		809	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																	.	.											.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																	.	.											.	.	.	.
Template Sequence		L	W	Q	S	D	P	E	T	P	L	K	V	Y	Q	L	L	S	G	A	.	.	.	.	.	.	.	.	.	H	Y	R	T	S	P	L	D	L	R	R	X	X	D	A	P	.	.	G	Q	H	F	L	Q	A	A	G	E	.	.	.	.
Template Known Secondary structure							T													T	.	.	.	.	.	.	.	.	.	S	S	S													T	.	.	T									S	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																	.	.											.	.	.	.
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.										.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.	.
		869	870	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	I	D	G	I	Y	Y	V	V
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	N	E	I	A	G	A	L
Template Known Secondary structure		.	.	.	.	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						403	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D