Job Description A2A4P0 Confidence 98.84% Date Wed Jul 10 14:06:11 BST 2013 Rank 109 Aligned Residues 124 % Identity 16% Template c2yjtD_ PDB info PDB header:hydrolase inhibitor/hydrolase Chain: D: PDB Molecule:atp-dependent rna helicase srmb; PDBTitle: crystal structure of e. coli dead-box protein srmb bound to2 regulator of ribonuclease activity a (rraa) Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		782	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		E	H	K	T	A	L	L	V	H	L	L	K	Q	P	E	A	T	R	S	I	V	F	V	R	K	R	E	R	V	H	E	L	A	N	W	L	R	E	A	.	.	.	.	.	.	.	.	.	G	I	N	N	C	Y	L	E	G	E	M	V
Template Known Secondary structure													S	S	T	T			S						S	S	S														.	.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.										.	.	.	.	.	.	.	.	280	.	.	.
		842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	V	K	Q	K	V	Y	N	S	K	T	G	I	D	Q	L	V	V	T
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	K	R	N	E	A	I	K	R	L	T	E	G	R	V	N	V	L	V	A	T	D	V	A	A	R	G	I	D	I	P	D	V	S	H	V	F	N	F	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S	T	T								T	G	G	G	S	S					S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		902	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.		.	920	.	.	.	.	.	.	.	.	.	930	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		P	I	S	Q	A	Q	A	K	Q	R	A	G	R	A	G	R	T	.	G	P	G	K	C	Y	R	L	Y	T	E	R	A	Y
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		P	R	S	G	D	T	Y	L	H	R	I	G	R	T	A	R	A	G	R	K	G	T	A	I	S	L	V	E	A	H	D	H
Template Known Secondary structure			S									G	G	G	S			S	S	S										G	G	G
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D