Job Description A2A4P0 Confidence 98.71% Date Wed Jul 10 14:06:11 BST 2013 Rank 119 Aligned Residues 305 % Identity 14% Template c2w00B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hsdr; PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp Resolution 2.6 Å

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		592	.	.	.	.	.	.	.	600	.	.	.	.											.	.	.	.	.	610	.	.	.	.	.	.	.	.	.				620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		Y	K	L	K	E	Q	L	V	Q	A	V	H	D	.	.	.	.	.	.	.	.	.	.	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	.	.	.	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G
Query Conservation															.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																.	.	.												.	.
Template Conservation																																																						.	.
Template Sequence		I	A	A	T	E	R	I	L	W	K	I	K	S	S	F	T	A	K	N	W	S	K	P	E	S	G	G	Y	I	W	H	T	T	G	S	G	K	T	L	T	S	F	K	A	A	R	L	A	T	E	L	D	.	.	F	I	D	K	V	F
Template Known Secondary structure																		T	T			S	S	G	G	G	S							T	T	S	S													T	T		T	.	.	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	.	.
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		F	V	V	D	R	K	D	L	D	Y	Q	T	X	K	E	Y	Q	R	F	S	P	D	S	V	N	G	S	E	N	T	A	G	L	K	R	N	L	D	K	D	D	N	K	I	I	V	T	T	I	Q	K	L	N	N	L	X	K	A	E	S
Template Known Secondary structure						G	G	G											T	T	S	T	T		S	S	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
			697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																					.	.	.	.	.	.	.
Query SS confidence		.																																																					.	.	.	.	.	.	.
Query Sequence		.	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	V	K	.	.	.	.	.	.	.
Query Conservation		.																																																					.	.	.	.	.	.	.
Alig confidence		.																	.						.	.	.	.																											.	.	.	.	.	.	.
Template Conservation																			.						.	.	.	.
Template Sequence		D	L	P	V	Y	N	Q	Q	V	V	F	I	F	D	E	C	H	.	R	S	Q	F	G	.	.	.	.	E	A	Q	K	N	L	K	K	K	F	K	R	Y	Y	Q	F	G	F	T	G	T	P	I	F	P	E	N	A	L	G	S	E	T
Template Known Secondary structure				G	G	G	G	S								S			.	T	T				.	.	.	.											S									S	S				S	T	T		T	T	S
Template Predicted Secondary structure																			.						.	.	.	.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		749	750	.	.	.	.	.	.	.	.	.	760	.							.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	Q	Y	F	Y	E	A	P	I	F	T	I	.	.	.	.	.	.	P	G	R	T	Y	P	V	E	I	L	Y	T	K	E	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	S	V	F	G	R	E	L	H	S	Y	V	I	T	D	A	I	R	D	E	K	V	L	K	F	K	V	D	Y	N	D	V	R	P	Q	F	K	S	L	E	T	E	T	D	E	K	K	L	S	A	A	E	N	Q	Q	A	F	L	H
Template Known Secondary structure								S														T	S	S												T	T	T					T										T		S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
											779	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																													.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																													.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	.	.	.	S	L	G	P
Query Conservation		.	.	.	.	.	.	.	.	.																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation
Template Sequence		P	X	R	I	Q	E	I	T	Q	Y	I	L	N	N	F	R	Q	K	T	H	R	T	F	P	G	S	K	G	F	N	A	X	L	A	V	S	S	V	D	A	A	K	A	Y	Y	A	T	F	K	R	L	Q	E	E	A	A	N	K	S	A
Template Known Secondary structure																					T			S	S	S											S	S																						S	S
Template Predicted Secondary structure
Template SS confidence
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.																																													.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	Y	K	P	L	R	I	A	T	I	F	S	F	A	A	I	G	E	I	S	D	E	T	F	D	T	S	A	X	D	S	S	A	K	E	F	L	D	A	A	I	R	E	Y	N	S	H	F	K	T	N	F	S	T	D	S	N	G	F	Q
Template Known Secondary structure		S																							S		G	G	G	S																				T					S	S
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	V	K	Q	K	V	Y	N	S	K	T	G	I	D	Q	L	V	V	T	P
Query Conservation
Alig confidence																																							.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Y	Y	R	D	L	A	Q	R	V	K	N	Q	D	I	D	L	L	I	V	V	G	X	F	L	T	G	F	D	A	P	T	L	N	T	L	F	.	.	.	V	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure													T	T	S	S	S					S	S	T	T	S	S	S				T	T						.	.	.			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.				.	.	.																	.
		903	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.		920	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	S	Q	A	Q	A	K	Q	R	A	G	R	A	G	R	T	G	.	P	G	K
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		L	R	Y	H	G	L	X	Q	A	F	S	R	T	N	R	I	Y	D	A	T	K
Template Known Secondary structure												G	G	G						T	T
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.