Job Description A2A4P0 Confidence 96.60% Date Wed Jul 10 14:06:11 BST 2013 Rank 207 Aligned Residues 131 % Identity 18% Template c2vsfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dna repair helicase rad3 related protein; PDBTitle: structure of xpd from thermoplasma acidophilum Resolution 2.9 Å

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		736	.	.	.	740	.	.	.	.		.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.				.	.	770	.	.	.	.	.	.								.	.	.	780	.	.	.	.
Predicted Secondary structure											.																								.	.	.										.	.	.	.	.	.	.
Query SS confidence											.																								.	.	.										.	.	.	.	.	.	.
Query Sequence		K	L	I	V	T	S	A	T	L	.	D	A	V	K	F	S	Q	Y	F	Y	E	A	P	I	F	T	I	P	G	R	T	Y	P	.	.	.	V	E	I	L	Y	T	K	E	P	.	.	.	.	.	.	.	E	T	D	Y	L	D	A	S
Query Conservation											.																								.	.	.										.	.	.	.	.	.	.
Alig confidence											.																								.	.	.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	T	I	H	M	S	G	T	L	D	P	F	D	F	Y	S	D	I	T	G	F	E	I	P	F	K	K	I	G	E	I	F	P	P	E	N	R	Y	I	A	Y	Y	D	G	V	S	S	K	Y	D	T	L	D	E	K	E	L	D	R	M
Template Known Secondary structure								S				S									T									S					G	G	G							S	S	S			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M
Query Conservation
Alig confidence														.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	V	I	E	D	I	I	L	K	V	K	.	K	N	T	I	V	Y	F	P	S	Y	S	L	M	D	R	V	E	N	R	V	.	.	.	.	.	.	.	.	.	.	.	.	S	F	E	H	M	K	E	Y	R	G	I	D	Q	K	E
Template Known Secondary structure														.	S							S	S												.	.	.	.	.	.	.	.	.	.	.	.		S							T	T
Template Predicted Secondary structure														.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.													.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		845	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.			.	.	.	.	880	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	.	.	Y	Y	V	V	D	P	G	F
Query Conservation																																	.	.
Alig confidence														.							.	.	.										.	.
Template Conservation														.							.	.	.
Template Sequence		L	Y	S	M	L	K	K	F	R	R	D	H	.	G	T	I	F	A	V	.	.	.	S	G	G	R	L	S	E	G	N	E	L	E	M	I	I	L	A	G	L
Template Known Secondary structure												S		.							.	.	.	T	T	S	G	G	G											S	S
Template Predicted Secondary structure														.							.	.	.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.				.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D