Job Description A2A4P0 Confidence 99.89% Date Wed Jul 10 14:06:11 BST 2013 Rank 28 Aligned Residues 327 % Identity 15% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620			.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	.	.	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V
Query Conservation																														.	.
Alig confidence																														.	.							.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.
Template Sequence		P	L	Q	L	E	T	I	N	V	T	M	A	G	K	E	V	F	L	V	M	P	T	G	G	G	K	S	L	C	Y	Q	L	P	A	L	C	.	.	.	.	.	.	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q
Template Known Secondary structure		T	T										T	T									T	T	S			T									S	.	.	.	.	.	.	S	S	S							S
Template Predicted Secondary structure																																						.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		651	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.									670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.							.	690	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	.	.	.	.	.	.	.	.	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	.	.	.	.	.	.	M	L	L	R	E	C	L	I
Query Conservation																					.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence							.														.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation							.
Template Sequence		L	M	V	L	K	.	Q	L	G	I	S	A	T	M	L	N	A	S	S	S	K	E	H	V	K	W	V	H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	K	I	A	K	S	K	M	F	M	S	R	L	E	K
Template Known Secondary structure							.			T								S	S																T	T										T					S
Template Predicted Secondary structure							.
Template SS confidence
		148	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.				.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	.	.	.	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	V	K	F	S	Q	Y	F
Query Conservation																		.	.	.
Alig confidence																		.	.	.
Template Conservation
Template Sequence		A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C	C	S	Q	W	G	H	D	F	R	P	D	Y	K	A	L	G	I	L	K	R	Q	F	P	N	A	S	L	I	G	L	T	A	T	A	T	N	H	V	L	T	D	A	Q
Template Known Secondary structure					T	T									T	G	G	G	G	S	T	T	S	T	T			G	G	G	G	G	G								T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
						754	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Y	E	A	P	I	F	T	I	P	G	R	T	Y	P	V	E	I	L	Y	T	K	E	P	E	T	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	I	L	C	I	E	K	C	F	T	F	T	A	S	F	N	R	P	N	L	Y	Y	E	V	R	Q	K	P	S	N	T	E	D	F	I	E	D	I	V	K	L	I	N	G	R	Y	K	G	Q	S	G	I	I	Y	C	F	S	Q	K	D
Template Known Secondary structure				T	T			S											T	T										S	S													T	T	T	T	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D	V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.
Template Sequence		S	E	Q	V	T	V	S	L	Q	N	L	.	.	.	.	.	.	.	.	.	G	I	H	A	G	A	Y	H	A	N	L	E	P	E	D	K	T	T	V	H	R	K	W	S	A	N	E	I	Q	V	V	V	A	T	V	A	F	G	M	G
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	.	T								T	T	S														T	T	S	S	S						T	T	S		T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.		.	920	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	V	K	Q	K	V	Y	N	S	K	T	G	I	D	Q	L	V	V	T	P	I	S	Q	A	Q	A	K	Q	R	A	G	R	A	G	R	T	.	G	P	G	K	C	Y	R	L	Y	T
Query Conservation																																																			.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	K	P	D	V	R	F	V	I	H	H	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	S	M	E	N	Y	Y	Q	E	S	G	R	A	G	R	D	D	M	K	A	D	C	I	L	Y	Y	G
Template Known Secondary structure					T	T							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S									T	T	S		T	T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.																			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		929	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	Y	R	D	E	M	L	T	T	N	V	P	E	I	Q	R	T	N	L	A	S	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	D	I	F	R	I	S	S	M	V	V	M	E	N	V	G	Q	Q	K	L	Y	E	M	V
Template Known Secondary structure												T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D