Job Description A2A4P0 Confidence 96.11% Date Wed Jul 10 14:06:11 BST 2013 Rank 240 Aligned Residues 133 % Identity 20% Template c2v1uA_ PDB info PDB header:replication Chain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna Resolution 3.10 Å

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		596	.	.	.	600	.	.	.	.	.							.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.							.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		E	Q	L	V	Q	A	V	H	D	N	.	.	.	.	.	.	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	.	.	.	.	.	.	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R
Query Conservation												.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	L	A	E	V	L	A	P	A	L	R	G	E	K	P	S	N	A	L	L	Y	G	L	T	G	T	G	K	T	A	V	A	R	L	V	L	R	R	L	E	A	R	A	S	S	L	G	V	L	V	K	P	I	Y	V	N	A	R	H
Template Known Secondary structure							T	T	G	G	G	T	S	S										B		T	T	S	S																				T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	T	P	Y	R	V	A	S	A	I	A	E	A	V	G	V	R	V	P	F	T	G	L	S	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	Y	E	R	L	V	K	R	L	S	R	L	R	G	I
Template Known Secondary structure		S		S													S					S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T	S		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	I	V	L	D	E	I	D	F	L	P	K	R	P	G	G	Q	D	L	L	Y	R	I	T	R	I	N	Q	E	L	V	S	L	V	G	I	T	N	S	L	G
Template Known Secondary structure								T	T	T					S	T	T											G	G	G										S		S	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D