Job Description A2A4P0 Confidence 94.48% Date Wed Jul 10 14:06:11 BST 2013 Rank 312 Aligned Residues 130 % Identity 20% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		596	.	.	.	600	.	.	.	.							.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.											.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	V	Q	A	V	H	D	.	.	.	.	.	.	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	.	.	.	.	.	.	.	.	.	.	A	G	Y	T	S	R	G	K	I	G	C
Query Conservation											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C
Template Known Secondary structure													T	T												T	T	S	S																			S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	V	G	G	T	P	Q	A	V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	E	Y	I	D	K	I	K	N	G	T
Template Known Secondary structure						S																S				S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																				.	.	130	.	.	.	.	.	.	.	.	.	140
		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		R	N	I	R	A	I	I	Y	L	D	E	V	.	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	N	I	S	V	I	M	I	S	N	D	I	N
Template Known Secondary structure		S	S	S								T	T	.						S	T	T	S									T	S	S	S									S	S	T	T
Template Predicted Secondary structure														.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D