Job Description A2A4P0 Confidence 95.45% Date Wed Jul 10 14:06:11 BST 2013 Rank 278 Aligned Residues 152 % Identity 22% Template c2pzfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cystic fibrosis transmembrane conductance regulator; PDBTitle: minimal human cftr first nucleotide binding domain as a head-to-tail2 dimer with delta f508 Resolution 2.00 Å

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		602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		I	E	R	G	Q	L	L	A	V	A	G	S	T	G	A	G	K	T	S	.	L	L	M	M	I	M	G	E	L	E	P	S	E	G	K	I	K	H	S	G	R	I	S	F	C	S	Q	F	S	W	I	M	P	G	T	I	K	E	N	I
Template Known Secondary structure				T	T								S	T	T	S	S				.						T	T	S	S			S								S							T	T					S
Template Predicted Secondary structure																					.
Template SS confidence
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
				640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.		.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure		.	.																	.
Query SS confidence		.	.																	.
Query Sequence		.	.	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	.	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I
Query Conservation		.	.																	.
Alig confidence		.	.																	.										.	.													.	.	.	.	.	.
Template Conservation																														.	.													.	.	.	.	.	.
Template Sequence		I	G	V	S	Y	D	E	Y	R	Y	R	S	V	I	K	A	C	Q	L	E	E	D	I	S	K	F	A	E	.	.	K	D	N	I	V	L	G	E	G	G	I	T	.	.	.	.	.	.	L	S	G	G	Q	R	A	R	I	S	L	A
Template Known Secondary structure			T	T														T	T						T	T	S	T	T	.	.	G	G	G					T	T		T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure																														.	.													.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.			.	.	.	.	.	540	.	.	.	.	.	.							.	.	.	550	.	.	.	.	.	.	.	.
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	V	K	F	S	Q	Y	F	Y	E	A
Query Conservation
Alig confidence																	.																														.									.
Template Conservation																	.																														.									.
Template Sequence		R	A	V	Y	K	D	A	D	L	Y	L	L	D	S	P	.	F	G	Y	L	D	V	L	T	E	K	E	I	F	E	S	C	V	C	K	L	M	A	N	K	T	R	I	L	V	.	T	S	K	M	E	H	L	K	.	K	A	D	K	I
Template Known Secondary structure						S			S						S	T	.	T	T	T	S																	T	T	T	S						.									.			S
Template Predicted Secondary structure																	.																														.									.
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.		.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.		.	.	.	.	.	.	610	.		.	.	.	.	.
		757	.	.	760	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	F	T	I	P	G	R	T	Y
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		L	I	L	H	.	E	G	S	S	Y
Template Known Secondary structure						.	T	T
Template Predicted Secondary structure						.
Template SS confidence
		617	.	.	620		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D