Job Description A2A4P0 Confidence 98.92% Date Wed Jul 10 14:06:11 BST 2013 Rank 101 Aligned Residues 150 % Identity 21% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		591	.	.	.	.	.	.	.	.	600	.	.										.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.			.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		I	Y	K	L	K	E	Q	L	V	Q	A	V	.	.	.	.	.	.	.	.	.	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	.	.	I	G	C
Query Conservation														.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence														.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		V	G	K	L	Q	E	I	L	C	D	M	L	P	S	A	D	K	W	Q	E	P	I	H	S	K	Y	I	V	L	F	G	S	T	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T
Template Known Secondary structure												T	S			S	T	T	S				S		S	S	B							S	S	S																T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		T	D	T	Y	R	I	A	A	V	E	Q	L	K	T	Y	A	E	L	L	Q	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	V	C	Y	T	K	E	E	F	Q	Q	A	K	E	.	.	L
Template Known Secondary structure					S	S	T	T	T	T					T					T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S										.	.	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.
		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.		740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	.	T	S	A	T	L	D	A	V	K	F	S	Q	Y	F	Y	E	A	P	I
Query Conservation																																										.
Alig confidence														.																												.
Template Conservation														.
Template Sequence		F	S	E	Y	D	H	V	F	V	D	T	A	.	G	R	N	F	K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	S	A	T	A	K	Y	E	D	M	K	H	I	V	K	R	F	S	S
Template Known Secondary structure		T	T	T	S	S								.					S	S	G	G	G	T							S				T	T	B								T	T	S						T	T	T	T	T	T	S	S	S
Template Predicted Secondary structure														.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		759	760	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	I	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	P	V	N	Q
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D