Job Description A2A4P0 Confidence 99.04% Date Wed Jul 10 14:06:11 BST 2013 Rank 88 Aligned Residues 211 % Identity 15% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	R	G	I	G	M	M	P	N	D	I	P	E	W	K	K	H	A	F	G	G	N	K	A	S	Y	G	K	K	T	Q	M	S	I	L	E	Q	R	E	S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	E	S	I	S	R	L	M	Q	N	Y	E	K	I	N	V	N	E	I	T	R	F	S	D	F	P	L	S	K	K	T	L	K	G	L	Q	E	A	Q	Y	R	L	V	T	E	I	Q	K	Q	T	I	G	L	A	L	Q	G	K	D
Template Known Secondary structure												T	T	T	T			G	G	G		S	B	G	G	G	S													T	T			B														T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		608	.	610	.	.	.	.	.	.	.	.	.	620			.	.	.	.	.	.	.	.					.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure															.	.									.	.	.	.
Query SS confidence															.	.									.	.	.	.
Query Sequence		L	I	V	I	G	E	T	G	S	G	K	T	T	.	.	Q	I	T	Q	Y	L	A	E	.	.	.	.	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C
Query Conservation															.	.									.	.	.	.
Alig confidence															.	.									.	.	.	.
Template Conservation
Template Sequence		V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	S	T	D	G	L	G	V	L	I	I	S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K	V	G	K	N	H
Template Known Secondary structure								T	T	S																	T	T			G	G	G									S	S															T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		662	.	.	.	.	.	.	.	670	.	.	.			.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.			700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																											.	.
Query SS confidence														.	.																											.	.
Query Sequence		L	G	Q	E	V	G	Y	T	I	R	F	E	.	.	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	.	.	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H
Query Conservation														.	.																											.	.
Alig confidence														.	.																											.	.														.
Template Conservation																																																									.
Template Sequence		D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	.	R	I	L	D
Template Known Secondary structure		S																		T	T		S																	S	S				T	T							T	T			.
Template Predicted Secondary structure																																																									.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.
		718	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.			.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	.	.	V	K	F	S	Q	Y	F	Y	E	A	P	I	F
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K	K	R	Q	T	L	L	F	S	A	T	Q	T	K	S	V	K	D	L	A	R	L	S	L	K	N	P	E	Y
Template Known Secondary structure		T	T	T										T	S		T	T	S							S	S												S		S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D