Job Description A2A4P0 Confidence 95.27% Date Wed Jul 10 14:06:11 BST 2013 Rank 291 Aligned Residues 115 % Identity 22% Template c2j87D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thymidine kinase; PDBTitle: structure of vaccinia virus thymidine kinase in complex2 with dttp: insights for drug design Resolution 3.10 Å

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		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V
Query Conservation
Alig confidence																												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Q	L	I	I	G	P	M	F	S	G	K	S	T	E	L	I	R	R	V	R	R	Y	Q	I	A	.	Q	Y	K	C	V	T	I	K	Y	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	R	Y	G	T	W	T
Template Known Secondary structure								S	T	T	S	S														T	T	.	T								B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																												.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.		.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.		.
Template Sequence		H	D	K	N	N	F	E	A	L	E	A	T	K	.	.	.	.	.	.	.	.	.	.	.	L	C	D	V	L	Q	S	.	.	I	T	D	F	S	V	I	G	I	D	E	G	Q	F	F	P	.	.	.	D	.	I	V	E	F	C	E
Template Known Secondary structure				S	S	S	S	S				B	S		.	.	.	.	.	.	.	.	.	.	.					T	T	T	.	.	G	G	G		S						T	G	G	G		T	.	.	.	T	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.		.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.												.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.		90	.	.	.	.	.
		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	V	Q	K	R	Q	D	M	K	L	I	V	T	S	A	T	L	D	A	V	K	F	S	Q	Y	F	Y	E	A	P
Query Conservation
Alig confidence							.	.							.	.
Template Conservation							.	.							.	.
Template Sequence		R	M	A	N	E	.	.	G	K	I	V	I	V	.	.	A	A	L	D	G	T	F	Q	R	K	P	F	N	N	I	L
Template Known Secondary structure						T	.	.	T						.	.				S	B		T	T	S		B		T	T	T	G
Template Predicted Secondary structure							.	.							.	.
Template SS confidence
		96	.	.	.	100			.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D