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Job DescriptionA2A4P0
Confidence94.89%DateWed Jul 10 14:06:11 BST 2013
Rank303Aligned Residues143
% Identity20%Templatec2ihyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   602.......610.........620.........630......... 640.........650..
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Query Sequence  VHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGC. . . . . . . . . TQPRRVAAMSVAK
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Template Sequence  IAKGDKWILYGLNGAGKTT. LLNILNAYEPATSGTVNLFGKXPGKVGYSAETVRQHIGFV
Template Known Secondary structure  TT


TTSS.TTSS

STTB
TTSTT

TT
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   25....30.........40... ......50.........60.........70.........80...
 
   653......660.........670.... .....680.....
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Query Sequence  RVSEEFGCCLGQEVGYTIRFED. . . . . . . . . . . . . . . . . . . . . . . . . . . CTSPETVIKYM
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Template Sequence  SHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGXSAKAQQYIGYL
Template Known Secondary structure 
TTS
TTSBTTT
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TT
GGGTTSBGGGS
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   84.....90.........100.........110.........120.........130.........140...
 
   686...690.........700.........710.... .....720.........730.........740...
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Query Sequence  TDGMLLRECLIDPDLTQYAIIMLDEAHER. . TIHTDVLFGLLKKTVQKRQDMKLIVTSAT
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Template Sequence  STGEKQRVXIARALXGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAXIYVTHF
Template Known Secondary structure 
TTT

SSTTTT


TT
S
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   144.....150.........160.........170.........180.........190.........200...
 
   744.
Predicted Secondary structure 

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Query Sequence  LD
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  IE
Template Known Secondary structure  GG
Template Predicted Secondary structure 
Template SS confidence 

   204.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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