Job Description A2A4P0 Confidence 98.78% Date Wed Jul 10 14:06:11 BST 2013 Rank 116 Aligned Residues 132 % Identity 21% Template c2hjvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein Resolution 1.95 Å

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		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	I	L	Y	T	K	E	P	E	T	D	Y	L	D	A	S	L	I	T	V	M	Q	I	H	L	T	E	P	P	G	D	I	L	V	F	L	T	G	Q	E	E	I	D	T	A	C	E	I	L	Y	E	R	M	K	S	L	G	P	D
Query Conservation
Alig confidence																		.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																																		.	.	.	.	.	.	.
Template Sequence		I	E	H	A	V	I	Q	V	R	E	E	N	K	F	S	L	.	.	.	.	L	K	D	V	L	M	T	E	N	P	D	S	C	I	I	F	C	R	T	K	E	H	V	N	Q	L	T	D	E	L	D	D	L	.	.	.	.	.	.	.
Template Known Secondary structure											G	G	G					.	.	.	.											S	S						S	S														T	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																																		.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	E	L	I	I	L	P	V	Y	S	A	L	P	S	E	M	Q	T	R	I	F	D	P	A	P	P	G	S	R	K	V	V	I	A	T	N	I	A	E	T	S	L	T	I	D	G	I	Y	Y	V	V	D	P	G	F	V	K	Q	K
Query Conservation
Alig confidence		.	.																																																							.	.	.	.
Template Conservation		.	.																																																							.	.	.	.
Template Sequence		.	.	G	Y	P	C	D	K	I	H	G	G	M	I	Q	E	D	R	F	D	V	M	N	E	F	K	R	G	E	Y	R	Y	L	V	A	T	D	V	A	A	R	G	I	D	I	E	N	I	S	L	V	I	N	Y	D	L	.	.	.	.
Template Known Secondary structure		.	.	T								T	T	S															T	S		S						T	T	T	T	T	T	S					B	S					S	S		.	.	.	.
Template Predicted Secondary structure		.	.																																																							.	.	.	.
Template SS confidence
				264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		888	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.		.	920	.	.	.	.	.	.	.	.	.	930
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		V	Y	N	S	K	T	G	I	D	Q	L	V	V	T	P	I	S	Q	A	Q	A	K	Q	R	A	G	R	A	G	R	T	.	G	P	G	K	C	Y	R	L	Y	T	E	R
Query Conservation																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	K	E	S	Y	V	H	R	T	G	R	T	G	R	A	G	N	K	G	K	A	I	S	F	V	T	A	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S									T	T	B		B	T	T	B										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D