Job Description A2A4P0 Confidence 98.93% Date Wed Jul 10 14:06:11 BST 2013 Rank 98 Aligned Residues 190 % Identity 18% Template c2gxqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: hera n-terminal domain in complex with amp, crystal form 1 Resolution 1.20 Å

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		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		G	N	K	A	S	Y	G	K	K	T	Q	M	S	I	L	E	Q	R	E	S	L	P	I	Y	K	L	K	E	Q	L	V	Q	A	V	H	D	N	Q	I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	I	T	Q	Y	L	A	.
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		E	F	K	D	F	P	L	K	P	E	I	L	E	A	L	H	G	R	G	L	T	T	P	T	P	I	Q	A	A	A	L	P	L	A	L	E	G	K	D	L	I	G	Q	A	R	T	G	T	G	K	T	L	A	F	A	L	P	I	A	E
Template Known Secondary structure			G	G	G	S													T	T			S														T	T									T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
						628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.				.	.	.	.	.	.	680
Predicted Secondary structure		.	.	.	.																																															.	.	.
Query SS confidence		.	.	.	.																																															.	.	.
Query Sequence		.	.	.	.	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q	E	V	G	Y	T	I	R	F	E	.	.	.	D	C	T	S	P	E	T
Query Conservation		.	.	.	.																																															.	.	.
Alig confidence		.	.	.	.																																															.	.	.
Template Conservation
Template Sequence		R	L	A	P	S	Q	E	R	G	R	K	P	R	A	L	V	L	T	P	T	R	E	L	A	L	Q	V	A	S	E	L	T	A	V	A	P	H	L	K	V	V	A	V	Y	G	G	T	G	Y	G	K	Q	K	E	A	L	L	R	G	A
Template Known Secondary structure									T	T				S						S	S																T	T	S							S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		V	I	K	Y	M	T	D	G	M	L	L	R	E	C	L	I	D	P	D	.	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V	L	F	G	L	L	K	K	T	V	Q	K	R	Q	D	M	K	L	I	V
Query Conservation																					.
Alig confidence																					.															.
Template Conservation																																				.
Template Sequence		D	A	V	V	A	T	P	G	R	A	L	D	Y	L	R	Q	G	V	L	D	L	S	R	V	E	V	A	V	L	D	E	A	D	E	.	M	L	S	M	G	F	E	E	E	V	E	A	L	L	S	A	T	P	P	S	R	Q	T	L	L
Template Known Secondary structure		S																T	S	S			T	T		S						S				.				T	T											T	S		T	T	S
Template Predicted Secondary structure																																				.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		740	.	.	.	.	.	.			.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		T	S	A	T	L	D	A	.	.	V	K	F	S	Q	Y	F	Y	E	A	P	I	F
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		F	S	A	T	L	P	S	W	A	K	R	L	A	E	R	Y	M	K	N	P	V	L
Template Known Secondary structure				S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D