Return to main results Retrieve Phyre Job Id

Job DescriptionA2A4P0
Confidence96.03%DateWed Jul 10 14:06:11 BST 2013
Rank248Aligned Residues102
% Identity25%Templatec2dhrC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l)
Resolution3.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   608.610.........620.........630.........640.........650.........660.......
Predicted Secondary structure 























Query SS confidence 



























































Query Sequence  LIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVG
Query Conservation    
 
 










 
          
  




  
   
 

  
     
  

Alig confidence 











.............................













.....
Template Conservation 


 







............................. 

 


       .....
Template Sequence  VLLVGPPGVGKT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . HLARAVAGEARVPF. . . . .
Template Known Secondary structure 
STTSS.............................TT

.....
Template Predicted Secondary structure 





.............................



.....
Template SS confidence 



























































   192.......200... ......210.......
 
   668.670.........680.........690.........700.........710.......
Predicted Secondary structure 

























..........
Query SS confidence 

















































. . . . . . . . . .
Query Sequence  YTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIH. . . . . . . . . .
Query Conservation 
 

        
 
   
 
 

        
     

 

 


   ..........
Alig confidence 













....































..........
Template Conservation    
           ....     
   
  
      

 

    
             
Template Sequence  ITASGSDFVEMFVG. . . . VGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGND
Template Known Secondary structure  GGGGTSS
TT....TTSTTSSS

GGGT


SSSSTTTSS
Template Predicted Secondary structure 

....















Template SS confidence 



























































   218.220.........230. ........240.........250.........260.........270...
 
   718.720.........730.........740.......
Predicted Secondary structure  ..








Query SS confidence  . .





























Query Sequence  . . TDVLFGLLKKTVQKRQDMKLIVTSATLDAV
Query Conservation  .. 
 

  

     
  

 
  


    
Alig confidence  ..





























Template Conservation                       
 

  
    
Template Sequence  EREQTLNQLLVEMDGFEKDTAIVVMAATNRPD
Template Known Secondary structure  GGG

SS




S
GG
Template Predicted Secondary structure 







Template SS confidence 































   274.....280.........290.........300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D