Job Description A2A4P0 Confidence 92.76% Date Wed Jul 10 14:06:11 BST 2013 Rank 389 Aligned Residues 128 % Identity 20% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.			.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		I	L	I	V	I	G	E	T	G	S	G	K	T	T	Q	.	.	I	T	Q	Y	L	A	E	A	G	Y	T	S	R	G	K	I	G	C	T	Q	P	R	R	V	A	A	M	S	V	A	K	R	V	S	E	E	F	G	C	C	L	G	Q
Query Conservation																	.	.
Alig confidence											.	.	.				.	.										.	.																														.	.	.
Template Conservation											.	.	.															.	.																														.	.	.
Template Sequence		V	I	M	L	V	G	V	Q	G	.	.	.	T	T	A	G	K	L	A	Y	F	Y	K	K	K	G	.	.	F	K	V	G	L	V	G	A	D	V	Y	R	P	A	A	L	E	Q	L	Q	Q	L	G	Q	Q	I	G	V	P	.	.	.
Template Known Secondary structure								S			.	.	.													T	T	.	.											S	S															T			.	.	.
Template Predicted Secondary structure											.	.	.															.	.																														.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.					.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		E	V	G	Y	T	I	R	F	E	D	C	T	S	P	E	T	V	I	K	Y	M	T	D	G	.	.	.	.	M	L	L	R	E	C	L	I	D	P	D	L	T	Q	Y	A	I	I	M	L	D	E	A	H	E	R	T	I	H	T	D	V
Query Conservation																										.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	G	E	P	G	E	K	D	V	V	G	I	A	K	R	G	V	E	K	F	L	S	E	K	M	E	I	I	I	V	D	T	A	G	R	H	G	Y	G	E	E	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T																		T	T		S									S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
			721	.	.	.	.	.	.	.	.	730	.		.	.	.	.	.	.	.	.	740	.	.	.	.							.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.												.														.	.	.	.	.	.
Query SS confidence		.												.														.	.	.	.	.	.
Query Sequence		.	L	F	G	L	L	K	K	T	V	Q	K	.	R	Q	D	M	K	L	I	V	T	S	A	T	L	.	.	.	.	.	.	D	A	V	K	F	S	Q	Y	F	Y	E	A	P	I	F
Query Conservation		.												.														.	.	.	.	.	.
Alig confidence		.												.														.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	L	E	E	M	K	N	I	Y	E	A	I	K	P	D	E	V	T	L	V	I	D	A	S	I	G	Q	K	A	Y	D	L	A	S	K	F	N	Q	A	S	K	I	G	T	I	I
Template Known Secondary structure																	S								G	G	G	G	G	G													T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D