Return to main results Retrieve Phyre Job Id

Job DescriptionA2A4P0
Confidence95.87%DateWed Jul 10 14:06:11 BST 2013
Rank259Aligned Residues137
% Identity12%Templatec1fnnB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   596...600..... ....610.........620.........630..... ....640......
Predicted Secondary structure 
........














.



Query SS confidence 









. . . . . . . .





























.










Query Sequence  EQLVQAVHDN. . . . . . . . QILIVIGETGSGKTTQITQYLAEAGYTSRG. KIGCTQPRRVA
Query Conservation            ........    
 
 










 
         . 
  




  
Alig confidence 









........





























.










Template Conservation    
   
             
 
 
  
 


 

   
  
                  
Template Sequence  QQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN
Template Known Secondary structure  S
BSS



TTSSTTS


TTT

S
Template Predicted Secondary structure 






















Template SS confidence 



























































   26...30.........40.........50.........60.........70.........80.....
 
   647..650.........660.........670.........680.........690......... 700.....
Predicted Secondary structure 




















.




Query SS confidence 




















































.





Query Sequence  AMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPD. LTQYAI
Query Conservation 
   
 

  
     
  


 

        
 
   
 
 

        .
     
Alig confidence 


















..................















.





Template Conservation             
       ..................                       
Template Sequence  FTAIIGEIARSLNIPFPRR. . . . . . . . . . . . . . . . . . GLSRDEFLALLVEHLRERDLYMF
Template Known Secondary structure  T



SS..................


TT

Template Predicted Secondary structure 





..................








Template SS confidence 



























































   86...90.........100.... .....110.........120.......
 
   706...710.........720.........730.........740.........750
Predicted Secondary structure 














Query SS confidence 












































Query Sequence  IMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFS
Query Conservation 

 

 


    
 

  

     
  

 
  


       
Alig confidence 












































Template Conservation     
            
                 
  
       
Template Sequence  LVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLN
Template Known Secondary structure  TGGGS
TT
SSB
SST
Template Predicted Secondary structure 















Template SS confidence 












































   128.130.........140.........150.........160.........170..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D