Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 173 Aligned Residues 244 % Identity 25% Template c4ithB_ PDB info PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:receptor-interacting serine/threonine-protein kinase 1; PDBTitle: crystal structure of rip1 kinase in complex with necrostatin-1 analog Resolution 2.25 Å

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		13	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																						.	.	.
Query SS confidence									.	.	.	.	.																						.	.	.
Query Sequence		T	I	G	Q	G	G	C	.	.	.	.	.	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	.	.	.	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	D	H	P	N	I
Query Conservation									.	.	.	.	.																						.	.	.
Alig confidence									.	.	.	.	.														.								.	.	.
Template Conservation																											.
Template Sequence		K	M	K	S	S	D	F	L	E	S	A	E	L	K	V	S	L	A	F	H	R	T	Q	G	L	.	M	I	M	K	T	V	Y	K	G	P	N	C	I	E	H	N	E	A	L	L	E	E	A	K	M	M	N	R	L	R	H	S	R	V
Template Known Secondary structure					G	G	G	B		S			B									T	T	T			.									S		T	T																T			B	T	T	B
Template Predicted Secondary structure																											.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	L	L	G	V	I	I	E	E	G	K	Y	S	L	V	M	E	Y	M	E	K	G	N	L	M	H	V	L	K	A	E	M	S	T	P	L	S	V	K	G	R	I	I	L	E	I	I	E	G	M	A	Y	L	H	G	K	G	V	I
Template Known Secondary structure											T	T										T	T		B						T	S	S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.
Predicted Secondary structure																																						.	.																			.
Query SS confidence																																						.	.																			.
Query Sequence		H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	.	.	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	.	D	M	R
Query Conservation																																						.	.																			.
Alig confidence																																						.	.																			.
Template Conservation
Template Sequence		H	K	D	L	K	P	E	N	I	L	V	D	N	D	F	H	I	K	I	A	D	L	G	L	A	S	F	K	M	W	S	K	L	N	N	E	E	H	N	E	G	T	L	Y	Y	M	A	P	E	H	L	N	D	V	N	A	K	P	T	E
Template Known Secondary structure			S			S	G	G	G					T	T								T	T		T	T		S						T	T	S	S	S				G	G	G	T	S		G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220					.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																									.																	.	.	.	.
Query SS confidence																									.																	.	.	.	.
Query Sequence		K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	.	A	S	I	E	K	L	R	K	Q	I	V	A	G	K	C	S	.	.	.	.	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L
Query Conservation																									.																	.	.	.	.
Alig confidence																									.																	.	.	.	.
Template Conservation
Template Sequence		K	S	D	V	Y	S	F	A	V	V	L	W	A	I	F	A	N	K	E	P	Y	E	N	A	I	A	E	Q	Q	L	I	M	A	I	K	S	G	N	R	P	D	V	D	D	I	T	E	Y	C	P	R	E	I	I	S	L	M	K	L	C
Template Known Secondary structure																		S	S		S		T	T													T	T					G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		M	T	D	N	P	E	L	R	P	T	V	A	E	V	M	V	.	.	H	P	W	V	T
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		W	E	A	N	P	E	A	R	P	T	F	P	G	I	E	E	K	F	R	P	F	Y	L
Template Known Secondary structure		T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D