Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 192 Aligned Residues 219 % Identity 26% Template c4g3dE_ PDB info PDB header:transferase Chain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik) Resolution 2.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	D	H	P	N	I	I
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		R	E	E	V	H	W	A	T	H	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V
Template Known Secondary structure			B	T	T	T							S	S	S	S								T	T	T											T	T	T			T	.	.	.	.					T	T	T	T				T	T	B
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.					.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	Y	G	A	V	R	E	G	P	W	V	N	I	F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H
Template Known Secondary structure										T	T										T	T		B								S	S	S																							T	T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		R	D	L	T	P	D	N	I	M	V	E	K	D	.	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K	I	D
Query Conservation															.
Alig confidence															.																.	.	.	.	.	.	.	.	.																	.
Template Conservation																															.	.	.	.	.	.	.	.	.																	.
Template Sequence		G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	.	.	.	.	.	.	.	.	.	P	G	T	T	H	M	A	P	E	V	V	L	G	R	S	C	.	D	A	K	V	D
Template Known Secondary structure						G	G	G					S	S	S									T	T						.	.	.	.	.	.	.	.	.												T	T				.		T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.										.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.		.	560	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A	G	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	W	S	S	C	C	M	M	L	H	M	L	N	G	C	H	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q	E	G	L	R	K	E	P	I	H	R
Template Known Secondary structure															S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G			T	T	S												T		S	S	T	T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.															.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
		245	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	A	E	V	M	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	A	A	E	L	G	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D