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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank133Aligned Residues234
% Identity27%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40. ........50.........
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Query Sequence  FHAQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVK. . . . RECWFNPVMSEAELLMMT
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Template Sequence  INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL
Template Known Secondary structure  TTTTTTT



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TT
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   6...10.........20.........30.........40.........50.........60.....
 
   60.........70.........80.........90.........100.........110.........
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Query Sequence  DHPNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQLLSAVNYCH
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Template Sequence  SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH
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TTB



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   66...70.........80.........90.........100.........110.........120.....
 
   120.........130.........140.........150.........160.........170.........
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Query Sequence  NQGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCENYPFSTPEVLLSRPYD
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Template Sequence  DMRIVHRDIKPQNILIDSNKTLKIFDFGIA. . . . . . . . . . . . . KTVQYFSPEQAKGEAT.
Template Known Secondary structure  TT






GGG
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   126...130.........140.........150..... ....160.........170.
 
   180.........190.........200.........210......... 220.........230....
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Query Sequence  MRKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKC. . . . . SVPCRLSVELQDLIR
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Template Sequence  DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVIL
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   187..190.........200.........210.........220.........230.........240......
 
   235....240.... .....250.
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Query Sequence  LLMTDNPELR. PTVAEVM
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Template Sequence  RATEKDKANRYKTIQEMK
Template Known Secondary structure  T
SSTTTS
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   247..250.........260....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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