Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 102 Aligned Residues 253 % Identity 25% Template c4dn5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 14; PDBTitle: crystal structure of nf-kb-inducing kinase (nik) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	D
Query Conservation
Alig confidence																																																.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		Y	R	E	E	V	H	W	A	T	H	Q	L	R	L	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	E	E	L	M	A	C	A	G	L	T
Template Known Secondary structure				B	T	T	T					S	S		S				S	S									T	T	T											T	T	T			T	.	.	.	.					T	T	S	S
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	R	I	V	P	L	Y	G	A	V	R	E	G	P	W	V	N	I	F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	C	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S
Template Known Secondary structure			T	T	B										T	T										T	T		B									S	S
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	.	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D
Query Conservation																						.
Alig confidence																						.																.	.	.	.	.	.	.																	.
Template Conservation																																						.	.	.	.	.	.	.																	.
Template Sequence		R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C	L	Q	I	P	.	.	.	.	.	.	.	G	T	E	T	H	M	A	P	E	V	V	L	G	R	S	C	.
Template Known Secondary structure		T	T				S			S	G	G	G					T	T	S									T	T								.	.	.	.	.	.	.	S		G	G	G							T	T				.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																	.
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.								.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A	G	.	.	.	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.
Template Conservation
Template Sequence		D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L	N	G	C	H	P	W	T	Q	F	F	R	G	P	L	C	L	K	I	A	S	E	P	P	P	V	R	E	I	P	P	S	C	A	P	L	T	A	Q	A	I	Q	E	G
Template Known Secondary structure			T																	S	S		T	T	T	T	T			S									S			G	G	G	G	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250														.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	D	N	P	E	L	R	P	T	V	A	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	H	P	W	V	T	E	G	S	G	V	F	P	D
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R	A	L	Q	Q	V	G	G	L	K	S	P	W	R	G	E	Y	K	E	P	R	H	P
Template Known Secondary structure		S		S	S	T	T	S	S																		T	S	S		S		S	S
Template Predicted Secondary structure
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D