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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank185Aligned Residues244
% Identity29%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40..... ....50......... 60
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Query Sequence  AQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVKRECW. . . . FNPVMSEAELLMMT. D
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN
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TTTTT

TTTTT
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   353......360.........370.........380.........390.........400.........410..
 
   61........70.........80.........90.........100.........110.........120
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Query Sequence  HPNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNAGYLQEDEACPLFKQLLSAVNYCHN
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Template Sequence  HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD
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   413......420.........430.........440.........450.........460.........470..
 
   121........130.........140.........150.........160.........170.........180
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Query Sequence  QGIVHRDLTPDNIMVEKDGKVKIIDFGLGTQEKPAQKLNLFCENYPFSTPEVLLSRPYDM
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Template Sequence  KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI. . . . . . . . . CGTPDYIAPEILQEMLYG
Template Known Secondary structure  TT
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GGG
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GGG


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   473......480.........490.........500..... ....510.........520...
 
   181........190.........200.........210.........220.........230.........240
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Query Sequence  RKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVPCRLSVELQDLIRLLMTDN
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Template Sequence  PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKN
Template Known Secondary structure  TSS
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TTS
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   533......540.........550.........560.........570.........580.........590..
 
   241..... ...250........
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Query Sequence  PELRPT. . . . . . VAEVMVHPWVTE
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Template Sequence  PTMRLGSLTQGGEHAILRHPFFKE
Template Known Secondary structure  GGGSTTSGGGT
TTSGGGTT
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   593......600.........610......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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