Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 147 Aligned Residues 248 % Identity 23% Template c3qd2B_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:eukaryotic translation initiation factor 2-alpha kinase 3; PDBTitle: crsytal structure of mouse perk kinase domain Resolution 2.81 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	.	.	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	D	H
Query Conservation																																							.	.
Alig confidence																.																							.	.
Template Conservation																.
Template Sequence		Y	L	T	D	F	E	P	I	Q	C	M	G	R	G	.	F	G	V	V	F	E	A	K	N	K	V	D	D	C	N	Y	A	I	K	R	I	R	L	P	N	R	E	L	A	R	E	K	V	M	R	E	V	K	A	L	A	K	L	E	H
Template Known Secondary structure																.		S								T	T	T													S	T	T	T													T	S
Template Predicted Secondary structure																.
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.		.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.														.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Query Sequence		P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	.	.	.	Y	L	Q	E	D	E	A	C
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		P	G	I	V	R	Y	F	N	A	W	L	E	T	P	P	E	K	W	Q	E	E	M	D	E	P	K	V	Y	L	Y	I	Q	M	Q	L	C	R	K	E	N	L	K	D	W	M	N	R	R	C	S	L	E	D	R	E	H	G	V	C	L
Template Known Secondary structure		T	T	B												S																							S	S								T			S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	F	C	E	N	Y
Query Conservation
Alig confidence																																																								.	.	.
Template Conservation																																																								.	.	.
Template Sequence		H	I	F	I	Q	I	A	E	A	V	E	F	L	H	S	K	G	L	M	H	R	D	L	K	P	S	N	I	F	F	T	M	D	D	V	V	K	V	G	D	F	G	L	V	T	A	M	D	Q	D	T	H	G	Q	.	.	.	V	T	K
Template Known Secondary structure																	T	T								G	G	G					T	T									T	T					S							.	.	.			G
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		914	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.				.	.	970
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A	G	K	C	S	.	V	P	C	R
Query Conservation																																																									.
Alig confidence															.																								.	.																	.
Template Conservation															.																								.	.
Template Sequence		L	Y	M	S	P	E	Q	I	H	G	N	N	Y	.	S	H	K	V	D	I	F	S	L	G	L	I	L	F	E	L	L	Y	S	F	S	T	Q	.	.	M	E	R	V	R	I	I	T	D	V	R	N	L	K	F	P	L	L	F	T	Q
Template Known Secondary structure		G	G	S											.		T																S						.	.												T	T
Template Predicted Secondary structure															.																								.	.
Template SS confidence
		987	.	.	990	.	.	.	.	.	.	.	.	.		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.			.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R	P	T	V	A	E	V	M	V	H	P	W	V	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	P	Q	E	H	M	M	V	Q	D	M	L	S	P	S	P	T	E	R	P	E	A	T	D	I	I	E	N	A	I	F	E	N
Template Known Secondary structure																S	S	G	G	G	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D