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Job DescriptionA0JLX3
Confidence100.00%DateWed Jul 10 14:37:17 BST 2013
Rank112Aligned Residues251
% Identity25%Templatec3kvwA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity tyrosine-phosphorylation-regulated kinase PDBTitle: crystal structure of dual-specificity tyrosine phosphorylation2 regulated kinase 2 (dyrk2) in complex with an indirubin ligand
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.
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Query Sequence  EKFHAQYEMLETIGQGGCAQVKLAQHRLTGTHVAVKVIVKRECWFNPVMSEAELLMMTDH
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Template Sequence  DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK
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   143......150.........160.........170.........180.........190.........200..
 
   62.......70.........80.........90...... ...100.........110...
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Query Sequence  . . . . . . PNIISLLQVIETKKKLYLIMELCEGKSLYQHIQNA. . GYLQEDEACPLFKQLLS
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Template Sequence  QDKDNTMNVIHMLENFTFRNHICMTFELL. SMNLYELIKKNKFQGFSLPLVRKFAHSILQ
Template Known Secondary structure  T
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   203......210.........220.........230. ........240.........250.........260.
 
   114.....120.........130......... 140.........150.........160.........170.
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Query Sequence  AVNYCHNQGIVHRDLTPDNIMVEKDG. . KVKIIDFGLGTQEKPAQKLNLFCENYPFSTPE
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Template Sequence  CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTI. . . QSRFYRAPE
Template Known Secondary structure  T
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SGGGSSTTS




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GGG

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   262.......270.........280.........290.........300......... 310........
 
   172.......180.........190.........200.........210.........220..
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Query Sequence  VLLSRPYDMRKIDVWGLGVVLYFMVTGKILFDAASIEKLRKQIVAGKCSVP. . . . . . . . .
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Template Sequence  VILGARY. GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR
Template Known Secondary structure  TB

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   320...... ...330.........340.........350.........360.........370........
 
   223......230.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . CRLSVELQDLIRL
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Template Sequence  AKNFVSKGYPRYCTVTTLSDVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ
Template Known Secondary structure  B



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   379380.........390.........400.........410.........420.........430........
 
   236...240.........250.......
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Query Sequence  LMTDNPELRPTVAEVMVHPWVT
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Template Sequence  CLEWDPAVRMTPGQALRHPWLR
Template Known Secondary structure  T
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   442.......450.........460...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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