Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 131 Aligned Residues 247 % Identity 23% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.															.	.
Query SS confidence																								.	.	.	.	.															.	.
Query Sequence		H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	V	K	L	A	Q	.	.	.	.	.	H	R	L	T	G	T	H	V	A	V	K	V	I	V	.	.	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M
Query Conservation																								.	.	.	.	.															.	.
Alig confidence																								.	.	.	.	.															.	.
Template Conservation
Template Sequence		R	N	R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	K	P	S	A	H	L	T	E	R	E	A	L	M	S	E	L	K	V	L	S
Template Known Secondary structure		G	G	G											S	S										S	S	S	S	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
		58	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																			.	.	.	.	.
Predicted Secondary structure				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	.	D	H	P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	A	G	Y
Query Conservation				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	G	N	H	M	N	I	V	N	L	L	G	A	C	T	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	L	A
Template Known Secondary structure							T	T	B									S	S	S	S									T	T		B									G	G	G	G	S		S	S	S					B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		646	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		L	Q	E	D	E	A	C	P	L	F	K	Q	L	L	S	A	V	N	Y	C	H	N	Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	.	.	.
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		L	D	L	E	D	L	L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R	I	T	K	I	C	D	F	G	L	A	R	D	I	K	N	D	S	N	Y
Template Known Secondary structure																								T	T				S			S	G	G	G					T	T	T								G	G	G			G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		Q	K	L	N	L	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	D	M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	.	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I
Query Conservation																																												.
Alig confidence																									.																			.
Template Conservation																									.
Template Sequence		V	V	K	G	N	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	.	T	F	E	S	D	V	W	S	Y	G	I	F	L	W	E	L	F	S	L	G	S	S	P	Y	P	G	M	P	V	D	S	K	F	Y	K	M
Template Known Secondary structure					T	T					G	G	G	S								T			.																		T	T	T			S	S	T	T				S
Template Predicted Secondary structure																									.
Template SS confidence
		824	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.		.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
		215	.	.			.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		V	A	G	.	.	K	C	S	V	P	C	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R	P	T	V	A	E	V	M	V
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		I	K	E	G	F	R	M	L	S	P	E	H	A	P	A	E	M	Y	D	I	M	K	T	C	W	D	A	D	P	L	K	R	P	T	F	K	Q	I	V	Q
Template Known Secondary structure				T	T							T	T													T		S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		883	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D