Job Description A0JLX3 Confidence 100.00% Date Wed Jul 10 14:37:17 BST 2013 Rank 94 Aligned Residues 246 % Identity 30% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.
Predicted Secondary structure																				.																																							.
Query SS confidence																				.																																							.
Query Sequence		F	H	A	Q	Y	E	M	L	E	T	I	G	Q	G	G	C	A	Q	.	V	K	L	A	Q	H	R	L	T	G	T	H	V	A	V	K	V	I	V	K	R	E	C	W	F	N	P	V	M	S	E	A	E	L	L	M	M	T	.	D	H
Query Conservation																				.																																							.
Alig confidence																				.						.	.													.	.																		.
Template Conservation																										.	.													.	.
Template Sequence		L	K	N	L	V	V	S	E	K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	.	.	F	Q	G	R	P	V	A	V	K	R	M	L	.	.	I	D	F	C	D	I	A	L	M	E	I	K	L	L	T	E	S	D	D	H
Template Known Secondary structure				S	S				S							T	T	T								.	.	S	S	S										.	.	G	G	G															T	T	S
Template Predicted Secondary structure																										.	.													.	.
Template SS confidence
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.			.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		P	N	I	I	S	L	L	Q	V	I	E	T	K	K	K	L	Y	L	I	M	E	L	C	E	G	K	S	L	Y	Q	H	I	Q	N	A	G	Y	L	Q	E	D	E	.	.	.	.	.	.	.	A	C	P	L	F	K	Q	L	L	S	A
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																										.																		.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		P	N	V	I	R	Y	Y	C	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	.	L	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S	G
Template Known Secondary structure		T	T	B										T	T										S	.								T			S		S	T	T						S	S
Template Predicted Secondary structure																										.
Template SS confidence
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140														.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		V	N	Y	C	H	N	Q	G	I	V	H	R	D	L	T	P	D	N	I	M	V	E	K	D	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	I	I	D	F	G	L	G	T	Q	E	K	P	A	Q	K	L	N	L	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N
Template Known Secondary structure								T	T							S	T	T	T											S			S	S		S							B				S	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.
			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.																			.	.																				.
Query SS confidence		.																			.	.																				.
Query Sequence		.	F	C	E	N	Y	P	F	S	T	P	E	V	L	L	S	R	P	Y	.	.	D	M	R	K	I	D	V	W	G	L	G	V	V	L	Y	F	M	V	T	.	G	K	I	L	F	D	A	A	S	I	E	K	L	R	K	Q	I	V	A
Query Conservation		.																			.	.																				.
Alig confidence		.																			.	.																				.						.	.
Template Conservation																																																.	.
Template Sequence		N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	.	.	G	D	K	Y	S	R	E	S	N	I	I	R
Template Known Secondary structure				S	G	G	G	G	G							S	T	T	T						T																T	T	S			T	T	.	.		S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		848	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.			.	.	.	.	.	.	900	.	.	.	.	.
		217	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		G	K	C	S	V	P	C	.	.	.	.	.	.	.	R	L	S	V	E	L	Q	D	L	I	R	L	L	M	T	D	N	P	E	L	R	P	T	V	A	E	V	M	V	H	P	W	V
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	F	S	L	D	E	M	K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K	R	P	T	A	M	K	V	L	R	H	P	L	F
Template Known Secondary structure		T								T	T																		T		S	S	T	T	T	S								T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		934	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D